Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPENQ96T58 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPENQ96T58 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPENQ96T58 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPENQ96T58 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPENQ96T58 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPENQ96T58 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPENQ96T58 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SPENQ96T58 KRT87P-202ENST00000534226 1464 ntBASIC19.92■□□□□ 0.78
SPENQ96T58 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPENQ96T58 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPENQ96T58 LINC00543-201ENST00000567234 1845 ntBASIC19.91■□□□□ 0.78
SPENQ96T58 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPENQ96T58 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPENQ96T58 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPENQ96T58 TMEM191A-211ENST00000637163 1067 ntBASIC19.91■□□□□ 0.78
SPENQ96T58 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPENQ96T58 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPENQ96T58 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPENQ96T58 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPENQ96T58 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.91■□□□□ 0.78
SPENQ96T58 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.91■□□□□ 0.78
SPENQ96T58 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SPENQ96T58 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPENQ96T58 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPENQ96T58 PRORSD1P-201ENST00000295112 541 ntBASIC19.9■□□□□ 0.78
SPENQ96T58 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.9■□□□□ 0.78
SPENQ96T58 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPENQ96T58 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.9■□□□□ 0.78
SPENQ96T58 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.9■□□□□ 0.78
SPENQ96T58 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPENQ96T58 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPENQ96T58 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SPENQ96T58 KRT18P11-201ENST00000435214 1283 ntBASIC19.9■□□□□ 0.78
SPENQ96T58 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPENQ96T58 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPENQ96T58 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.89■□□□□ 0.78
SPENQ96T58 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPENQ96T58 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.89■□□□□ 0.77
SPENQ96T58 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.89■□□□□ 0.77
SPENQ96T58 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SPENQ96T58 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPENQ96T58 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SPENQ96T58 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.89■□□□□ 0.77
SPENQ96T58 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SPENQ96T58 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.89■□□□□ 0.77
SPENQ96T58 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.89■□□□□ 0.77
SPENQ96T58 CNN2P6-201ENST00000439038 900 ntBASIC19.88■□□□□ 0.77
SPENQ96T58 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.88■□□□□ 0.77
SPENQ96T58 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPENQ96T58 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SPENQ96T58 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPENQ96T58 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.88■□□□□ 0.77
SPENQ96T58 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.88■□□□□ 0.77
SPENQ96T58 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.88■□□□□ 0.77
SPENQ96T58 AL161729.1-201ENST00000604104 1402 ntBASIC19.88■□□□□ 0.77
SPENQ96T58 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPENQ96T58 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.88■□□□□ 0.77
SPENQ96T58 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPENQ96T58 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
SPENQ96T58 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPENQ96T58 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPENQ96T58 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPENQ96T58 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SPENQ96T58 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPENQ96T58 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPENQ96T58 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
SPENQ96T58 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPENQ96T58 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPENQ96T58 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.86■□□□□ 0.77
SPENQ96T58 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.86■□□□□ 0.77
SPENQ96T58 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SPENQ96T58 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SPENQ96T58 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SPENQ96T58 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.86■□□□□ 0.77
SPENQ96T58 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.86■□□□□ 0.77
SPENQ96T58 DUX4L16-201ENST00000555130 1264 ntBASIC19.86■□□□□ 0.77
SPENQ96T58 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.86■□□□□ 0.77
SPENQ96T58 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.86■□□□□ 0.77
SPENQ96T58 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPENQ96T58 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
SPENQ96T58 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.86■□□□□ 0.77
SPENQ96T58 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
SPENQ96T58 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPENQ96T58 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.85■□□□□ 0.77
SPENQ96T58 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.85■□□□□ 0.77
SPENQ96T58 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.85■□□□□ 0.77
SPENQ96T58 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.85■□□□□ 0.77
SPENQ96T58 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
SPENQ96T58 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SPENQ96T58 LINC01529-204ENST00000636474 1715 ntBASIC19.85■□□□□ 0.77
SPENQ96T58 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPENQ96T58 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPENQ96T58 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPENQ96T58 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPENQ96T58 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
SPENQ96T58 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.84■□□□□ 0.77
SPENQ96T58 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.84■□□□□ 0.77
SPENQ96T58 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPENQ96T58 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms