Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH15Q96QU1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH15Q96QU1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH15Q96QU1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.54■■□□□ 1.04
PCDH15Q96QU1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
PCDH15Q96QU1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDH15Q96QU1 TMEM191A-211ENST00000637163 1067 ntBASIC21.54■■□□□ 1.04
PCDH15Q96QU1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.53■■□□□ 1.04
PCDH15Q96QU1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PCDH15Q96QU1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH15Q96QU1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PCDH15Q96QU1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDH15Q96QU1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH15Q96QU1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDH15Q96QU1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH15Q96QU1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDH15Q96QU1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDH15Q96QU1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH15Q96QU1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PCDH15Q96QU1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.52■■□□□ 1.04
PCDH15Q96QU1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PCDH15Q96QU1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDH15Q96QU1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDH15Q96QU1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.51■■□□□ 1.03
PCDH15Q96QU1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH15Q96QU1 CD99P1-205ENST00000527459 561 ntBASIC21.51■■□□□ 1.03
PCDH15Q96QU1 DUX4L16-201ENST00000555130 1264 ntBASIC21.51■■□□□ 1.03
PCDH15Q96QU1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.51■■□□□ 1.03
PCDH15Q96QU1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.51■■□□□ 1.03
PCDH15Q96QU1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH15Q96QU1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDH15Q96QU1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH15Q96QU1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH15Q96QU1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.5■■□□□ 1.03
PCDH15Q96QU1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH15Q96QU1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDH15Q96QU1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.5■■□□□ 1.03
PCDH15Q96QU1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH15Q96QU1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH15Q96QU1 AC079140.4-201ENST00000507448 529 ntBASIC21.5■■□□□ 1.03
PCDH15Q96QU1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDH15Q96QU1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDH15Q96QU1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH15Q96QU1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH15Q96QU1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH15Q96QU1 AC010141.3-201ENST00000456659 717 ntBASIC21.49■■□□□ 1.03
PCDH15Q96QU1 KRT18P6-201ENST00000555540 1265 ntBASIC21.49■■□□□ 1.03
PCDH15Q96QU1 MIR4651-201ENST00000582622 73 ntBASIC21.49■■□□□ 1.03
PCDH15Q96QU1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDH15Q96QU1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH15Q96QU1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDH15Q96QU1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDH15Q96QU1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH15Q96QU1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDH15Q96QU1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDH15Q96QU1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.48■■□□□ 1.03
PCDH15Q96QU1 UBE2DNL-204ENST00000602536 740 ntBASIC21.48■■□□□ 1.03
PCDH15Q96QU1 AC104187.1-201ENST00000607510 612 ntBASIC21.48■■□□□ 1.03
PCDH15Q96QU1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH15Q96QU1 KRT87P-202ENST00000534226 1464 ntBASIC21.48■■□□□ 1.03
PCDH15Q96QU1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH15Q96QU1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PCDH15Q96QU1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDH15Q96QU1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDH15Q96QU1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDH15Q96QU1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH15Q96QU1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PCDH15Q96QU1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH15Q96QU1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH15Q96QU1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
PCDH15Q96QU1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
PCDH15Q96QU1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PCDH15Q96QU1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH15Q96QU1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH15Q96QU1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH15Q96QU1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH15Q96QU1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDH15Q96QU1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH15Q96QU1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH15Q96QU1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
PCDH15Q96QU1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH15Q96QU1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH15Q96QU1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH15Q96QU1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH15Q96QU1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH15Q96QU1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PCDH15Q96QU1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
PCDH15Q96QU1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDH15Q96QU1 TSPY20P-201ENST00000450910 630 ntBASIC21.47■■□□□ 1.03
PCDH15Q96QU1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
PCDH15Q96QU1 AL121832.2-201ENST00000610979 668 ntBASIC21.47■■□□□ 1.03
PCDH15Q96QU1 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDH15Q96QU1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH15Q96QU1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDH15Q96QU1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH15Q96QU1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDH15Q96QU1 AC005224.4-201ENST00000583262 1652 ntBASIC21.46■■□□□ 1.03
PCDH15Q96QU1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH15Q96QU1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH15Q96QU1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms