Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CALR3Q96L12 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CALR3Q96L12 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CALR3Q96L12 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.07■■□□□ 1.28
CALR3Q96L12 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.07■■□□□ 1.28
CALR3Q96L12 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.07■■□□□ 1.28
CALR3Q96L12 AC010997.5-201ENST00000609182 354 ntBASIC23.07■■□□□ 1.28
CALR3Q96L12 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
CALR3Q96L12 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
CALR3Q96L12 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CALR3Q96L12 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CALR3Q96L12 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CALR3Q96L12 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
CALR3Q96L12 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.06■■□□□ 1.28
CALR3Q96L12 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.06■■□□□ 1.28
CALR3Q96L12 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CALR3Q96L12 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CALR3Q96L12 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.06■■□□□ 1.28
CALR3Q96L12 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
CALR3Q96L12 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CALR3Q96L12 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CALR3Q96L12 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CALR3Q96L12 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
CALR3Q96L12 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CALR3Q96L12 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CALR3Q96L12 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.05■■□□□ 1.28
CALR3Q96L12 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
CALR3Q96L12 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
CALR3Q96L12 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CALR3Q96L12 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CALR3Q96L12 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.05■■□□□ 1.28
CALR3Q96L12 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CALR3Q96L12 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CALR3Q96L12 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CALR3Q96L12 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CALR3Q96L12 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CALR3Q96L12 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CALR3Q96L12 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CALR3Q96L12 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CALR3Q96L12 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.04■■□□□ 1.28
CALR3Q96L12 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CALR3Q96L12 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CALR3Q96L12 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CALR3Q96L12 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CALR3Q96L12 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.04■■□□□ 1.28
CALR3Q96L12 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CALR3Q96L12 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CALR3Q96L12 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CALR3Q96L12 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.03■■□□□ 1.28
CALR3Q96L12 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.03■■□□□ 1.28
CALR3Q96L12 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.03■■□□□ 1.28
CALR3Q96L12 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CALR3Q96L12 AC241377.3-202ENST00000626088 1088 ntBASIC23.03■■□□□ 1.28
CALR3Q96L12 AC241585.3-202ENST00000628937 1088 ntBASIC23.03■■□□□ 1.28
CALR3Q96L12 AC245100.8-202ENST00000629247 1058 ntBASIC23.03■■□□□ 1.28
CALR3Q96L12 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CALR3Q96L12 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.03■■□□□ 1.28
CALR3Q96L12 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CALR3Q96L12 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CALR3Q96L12 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CALR3Q96L12 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CALR3Q96L12 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CALR3Q96L12 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CALR3Q96L12 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.27
CALR3Q96L12 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
CALR3Q96L12 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CALR3Q96L12 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CALR3Q96L12 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CALR3Q96L12 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.01■■□□□ 1.27
CALR3Q96L12 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.01■■□□□ 1.27
CALR3Q96L12 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CALR3Q96L12 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
CALR3Q96L12 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CALR3Q96L12 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CALR3Q96L12 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CALR3Q96L12 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.01■■□□□ 1.27
CALR3Q96L12 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CALR3Q96L12 AC010542.4-201ENST00000563151 1910 ntBASIC23■■□□□ 1.27
CALR3Q96L12 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CALR3Q96L12 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23■■□□□ 1.27
CALR3Q96L12 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23■■□□□ 1.27
CALR3Q96L12 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23■■□□□ 1.27
CALR3Q96L12 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23■■□□□ 1.27
CALR3Q96L12 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CALR3Q96L12 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
CALR3Q96L12 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23■■□□□ 1.27
CALR3Q96L12 AC026310.3-201ENST00000625186 2373 ntBASIC23■■□□□ 1.27
CALR3Q96L12 RNF165-205ENST00000588679 2904 ntBASIC23■■□□□ 1.27
CALR3Q96L12 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.99■■□□□ 1.27
CALR3Q96L12 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CALR3Q96L12 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CALR3Q96L12 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.99■■□□□ 1.27
CALR3Q96L12 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CALR3Q96L12 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.99■■□□□ 1.27
CALR3Q96L12 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CALR3Q96L12 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.99■■□□□ 1.27
CALR3Q96L12 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CALR3Q96L12 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.98■■□□□ 1.27
CALR3Q96L12 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CALR3Q96L12 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms