Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 AC139530.1-201ENST00000575312 1977 ntBASIC18.86■□□□□ 0.61
CPNE2Q96FN4 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.86■□□□□ 0.61
CPNE2Q96FN4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CPNE2Q96FN4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.86■□□□□ 0.61
CPNE2Q96FN4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CPNE2Q96FN4 AC087742.1-201ENST00000575880 1738 ntBASIC18.86■□□□□ 0.61
CPNE2Q96FN4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE2Q96FN4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.86■□□□□ 0.61
CPNE2Q96FN4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE2Q96FN4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.86■□□□□ 0.61
CPNE2Q96FN4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE2Q96FN4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.86■□□□□ 0.61
CPNE2Q96FN4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE2Q96FN4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.86■□□□□ 0.61
CPNE2Q96FN4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE2Q96FN4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE2Q96FN4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE2Q96FN4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE2Q96FN4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.86■□□□□ 0.61
CPNE2Q96FN4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CPNE2Q96FN4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE2Q96FN4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CPNE2Q96FN4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.85■□□□□ 0.61
CPNE2Q96FN4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.85■□□□□ 0.61
CPNE2Q96FN4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.85■□□□□ 0.61
CPNE2Q96FN4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE2Q96FN4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CPNE2Q96FN4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.85■□□□□ 0.61
CPNE2Q96FN4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CPNE2Q96FN4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE2Q96FN4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.85■□□□□ 0.61
CPNE2Q96FN4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE2Q96FN4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE2Q96FN4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CPNE2Q96FN4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE2Q96FN4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE2Q96FN4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE2Q96FN4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.85■□□□□ 0.61
CPNE2Q96FN4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE2Q96FN4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE2Q96FN4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE2Q96FN4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CPNE2Q96FN4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE2Q96FN4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE2Q96FN4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE2Q96FN4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.84■□□□□ 0.61
CPNE2Q96FN4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.84■□□□□ 0.61
CPNE2Q96FN4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE2Q96FN4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.84■□□□□ 0.61
CPNE2Q96FN4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.84■□□□□ 0.61
CPNE2Q96FN4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE2Q96FN4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.84■□□□□ 0.61
CPNE2Q96FN4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE2Q96FN4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CPNE2Q96FN4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE2Q96FN4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE2Q96FN4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE2Q96FN4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.84■□□□□ 0.61
CPNE2Q96FN4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE2Q96FN4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.84■□□□□ 0.61
CPNE2Q96FN4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE2Q96FN4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.83■□□□□ 0.61
CPNE2Q96FN4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CPNE2Q96FN4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CPNE2Q96FN4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.83■□□□□ 0.61
CPNE2Q96FN4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CPNE2Q96FN4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CPNE2Q96FN4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.83■□□□□ 0.61
CPNE2Q96FN4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE2Q96FN4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.83■□□□□ 0.6
CPNE2Q96FN4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.83■□□□□ 0.6
CPNE2Q96FN4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE2Q96FN4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE2Q96FN4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE2Q96FN4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.83■□□□□ 0.6
CPNE2Q96FN4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE2Q96FN4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE2Q96FN4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE2Q96FN4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE2Q96FN4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE2Q96FN4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE2Q96FN4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE2Q96FN4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE2Q96FN4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CPNE2Q96FN4 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.82■□□□□ 0.6
CPNE2Q96FN4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.82■□□□□ 0.6
CPNE2Q96FN4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE2Q96FN4 MIR4787-201ENST00000607364 84 ntBASIC18.82■□□□□ 0.6
CPNE2Q96FN4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE2Q96FN4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE2Q96FN4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE2Q96FN4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.82■□□□□ 0.6
CPNE2Q96FN4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE2Q96FN4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE2Q96FN4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE2Q96FN4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE2Q96FN4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.81■□□□□ 0.6
CPNE2Q96FN4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CPNE2Q96FN4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CPNE2Q96FN4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms