Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTHRC1Q96CG8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTHRC1Q96CG8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTHRC1Q96CG8 AP001330.3-201ENST00000520123 633 ntBASIC20.34■□□□□ 0.85
CTHRC1Q96CG8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.34■□□□□ 0.85
CTHRC1Q96CG8 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.34■□□□□ 0.85
CTHRC1Q96CG8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTHRC1Q96CG8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTHRC1Q96CG8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTHRC1Q96CG8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTHRC1Q96CG8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTHRC1Q96CG8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTHRC1Q96CG8 AC010141.3-201ENST00000456659 717 ntBASIC20.33■□□□□ 0.85
CTHRC1Q96CG8 SUDS3P1-201ENST00000505831 966 ntBASIC20.33■□□□□ 0.85
CTHRC1Q96CG8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTHRC1Q96CG8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTHRC1Q96CG8 AC139530.1-201ENST00000575312 1977 ntBASIC20.33■□□□□ 0.84
CTHRC1Q96CG8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTHRC1Q96CG8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
CTHRC1Q96CG8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTHRC1Q96CG8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTHRC1Q96CG8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.32■□□□□ 0.84
CTHRC1Q96CG8 MIR939-201ENST00000401314 82 ntBASIC20.32■□□□□ 0.84
CTHRC1Q96CG8 AC027682.1-201ENST00000562846 899 ntBASIC20.32■□□□□ 0.84
CTHRC1Q96CG8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.32■□□□□ 0.84
CTHRC1Q96CG8 AC087239.1-201ENST00000622671 572 ntBASIC20.32■□□□□ 0.84
CTHRC1Q96CG8 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.32■□□□□ 0.84
CTHRC1Q96CG8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTHRC1Q96CG8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTHRC1Q96CG8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTHRC1Q96CG8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.31■□□□□ 0.84
CTHRC1Q96CG8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTHRC1Q96CG8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
CTHRC1Q96CG8 AC019069.1-201ENST00000610008 1333 ntBASIC20.31■□□□□ 0.84
CTHRC1Q96CG8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CTHRC1Q96CG8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTHRC1Q96CG8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CTHRC1Q96CG8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTHRC1Q96CG8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CTHRC1Q96CG8 AC079089.2-201ENST00000531211 1277 ntBASIC20.31■□□□□ 0.84
CTHRC1Q96CG8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.31■□□□□ 0.84
CTHRC1Q96CG8 AL136967.2-201ENST00000623968 743 ntBASIC20.31■□□□□ 0.84
CTHRC1Q96CG8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CTHRC1Q96CG8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.31■□□□□ 0.84
CTHRC1Q96CG8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.31■□□□□ 0.84
CTHRC1Q96CG8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTHRC1Q96CG8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTHRC1Q96CG8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.3■□□□□ 0.84
CTHRC1Q96CG8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CTHRC1Q96CG8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CTHRC1Q96CG8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTHRC1Q96CG8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTHRC1Q96CG8 AC099791.1-201ENST00000416440 715 ntBASIC20.3■□□□□ 0.84
CTHRC1Q96CG8 AC008764.7-201ENST00000593779 1081 ntBASIC20.3■□□□□ 0.84
CTHRC1Q96CG8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTHRC1Q96CG8 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.3■□□□□ 0.84
CTHRC1Q96CG8 OXCT2P1-201ENST00000447263 1535 ntBASIC20.3■□□□□ 0.84
CTHRC1Q96CG8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTHRC1Q96CG8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTHRC1Q96CG8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.3■□□□□ 0.84
CTHRC1Q96CG8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.29■□□□□ 0.84
CTHRC1Q96CG8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTHRC1Q96CG8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTHRC1Q96CG8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.29■□□□□ 0.84
CTHRC1Q96CG8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.29■□□□□ 0.84
CTHRC1Q96CG8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.29■□□□□ 0.84
CTHRC1Q96CG8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTHRC1Q96CG8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTHRC1Q96CG8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTHRC1Q96CG8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.29■□□□□ 0.84
CTHRC1Q96CG8 AF213884.3-201ENST00000563833 479 ntBASIC20.29■□□□□ 0.84
CTHRC1Q96CG8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTHRC1Q96CG8 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.29■□□□□ 0.84
CTHRC1Q96CG8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTHRC1Q96CG8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTHRC1Q96CG8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTHRC1Q96CG8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTHRC1Q96CG8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTHRC1Q96CG8 LINC00526-201ENST00000581067 1875 ntBASIC20.28■□□□□ 0.84
CTHRC1Q96CG8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CTHRC1Q96CG8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTHRC1Q96CG8 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTHRC1Q96CG8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTHRC1Q96CG8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTHRC1Q96CG8 AC091305.1-201ENST00000479476 895 ntBASIC20.28■□□□□ 0.84
CTHRC1Q96CG8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.28■□□□□ 0.84
CTHRC1Q96CG8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTHRC1Q96CG8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.28■□□□□ 0.84
CTHRC1Q96CG8 RASA4CP-201ENST00000424092 1398 ntBASIC20.28■□□□□ 0.84
CTHRC1Q96CG8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTHRC1Q96CG8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.28■□□□□ 0.84
CTHRC1Q96CG8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTHRC1Q96CG8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.28■□□□□ 0.84
CTHRC1Q96CG8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTHRC1Q96CG8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.27■□□□□ 0.84
CTHRC1Q96CG8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CTHRC1Q96CG8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.27■□□□□ 0.84
CTHRC1Q96CG8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTHRC1Q96CG8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTHRC1Q96CG8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms