Protein–RNA interactions for Protein: Q969M7

UBE2F, NEDD8-conjugating enzyme UBE2F, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2FQ969M7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2FQ969M7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
UBE2FQ969M7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.88■□□□□ 0.77
UBE2FQ969M7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2FQ969M7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2FQ969M7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2FQ969M7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2FQ969M7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.87■□□□□ 0.77
UBE2FQ969M7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2FQ969M7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2FQ969M7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.87■□□□□ 0.77
UBE2FQ969M7 THA1P-201ENST00000590384 1145 ntBASIC19.87■□□□□ 0.77
UBE2FQ969M7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
UBE2FQ969M7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2FQ969M7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2FQ969M7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2FQ969M7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.86■□□□□ 0.77
UBE2FQ969M7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2FQ969M7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.86■□□□□ 0.77
UBE2FQ969M7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
UBE2FQ969M7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2FQ969M7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
UBE2FQ969M7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
UBE2FQ969M7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2FQ969M7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2FQ969M7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2FQ969M7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.86■□□□□ 0.77
UBE2FQ969M7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2FQ969M7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2FQ969M7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
UBE2FQ969M7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2FQ969M7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2FQ969M7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2FQ969M7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2FQ969M7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2FQ969M7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
UBE2FQ969M7 LINC01529-204ENST00000636474 1715 ntBASIC19.85■□□□□ 0.77
UBE2FQ969M7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
UBE2FQ969M7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2FQ969M7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2FQ969M7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
UBE2FQ969M7 KRT18P24-201ENST00000344739 1156 ntBASIC19.85■□□□□ 0.77
UBE2FQ969M7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
UBE2FQ969M7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2FQ969M7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2FQ969M7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2FQ969M7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.85■□□□□ 0.77
UBE2FQ969M7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2FQ969M7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
UBE2FQ969M7 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.84■□□□□ 0.77
UBE2FQ969M7 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.84■□□□□ 0.77
UBE2FQ969M7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2FQ969M7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2FQ969M7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2FQ969M7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2FQ969M7 AC139795.1-202ENST00000500444 432 ntBASIC19.84■□□□□ 0.77
UBE2FQ969M7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2FQ969M7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
UBE2FQ969M7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2FQ969M7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.84■□□□□ 0.77
UBE2FQ969M7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2FQ969M7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2FQ969M7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2FQ969M7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2FQ969M7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2FQ969M7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2FQ969M7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.83■□□□□ 0.77
UBE2FQ969M7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBE2FQ969M7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBE2FQ969M7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.83■□□□□ 0.77
UBE2FQ969M7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBE2FQ969M7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBE2FQ969M7 PVT1_1.1-201ENST00000615125 194 ntBASIC19.83■□□□□ 0.77
UBE2FQ969M7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBE2FQ969M7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBE2FQ969M7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBE2FQ969M7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBE2FQ969M7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.83■□□□□ 0.76
UBE2FQ969M7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
UBE2FQ969M7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBE2FQ969M7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBE2FQ969M7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.83■□□□□ 0.76
UBE2FQ969M7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
UBE2FQ969M7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2FQ969M7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.82■□□□□ 0.76
UBE2FQ969M7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
UBE2FQ969M7 Z98882.1-201ENST00000622160 2253 ntBASIC19.82■□□□□ 0.76
UBE2FQ969M7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2FQ969M7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2FQ969M7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2FQ969M7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.82■□□□□ 0.76
UBE2FQ969M7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
UBE2FQ969M7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2FQ969M7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2FQ969M7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2FQ969M7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.82■□□□□ 0.76
UBE2FQ969M7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
UBE2FQ969M7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.82■□□□□ 0.76
UBE2FQ969M7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2FQ969M7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms