Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 AC091874.3-201ENST00000512672 1195 ntBASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 RPS2P55-201ENST00000397318 883 ntBASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 TSPY7P-201ENST00000431358 1114 ntBASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 UQCRFS1P1-201ENST00000435169 820 ntBASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 AC107956.1-201ENST00000494359 873 ntBASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SYNE2Q8WXH0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.96
SYNE2Q8WXH0 AC097658.1-201ENST00000475555 843 ntBASIC9.09□□□□□ -0.96
SYNE2Q8WXH0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC9.09□□□□□ -0.96
SYNE2Q8WXH0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC9.09□□□□□ -0.96
SYNE2Q8WXH0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC9.09□□□□□ -0.96
SYNE2Q8WXH0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC9.08□□□□□ -0.96
SYNE2Q8WXH0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 KRT87P-202ENST00000534226 1464 ntBASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 OR2A1-AS1-201ENST00000462305 773 ntBASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC9.07□□□□□ -0.96
SYNE2Q8WXH0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms