Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
TMEM40Q8WWA1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TMEM40Q8WWA1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TMEM40Q8WWA1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TMEM40Q8WWA1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.94■■□□□ 1.42
TMEM40Q8WWA1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.94■■□□□ 1.42
TMEM40Q8WWA1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.94■■□□□ 1.42
TMEM40Q8WWA1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.94■■□□□ 1.42
TMEM40Q8WWA1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.94■■□□□ 1.42
TMEM40Q8WWA1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
TMEM40Q8WWA1 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.93■■□□□ 1.42
TMEM40Q8WWA1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.93■■□□□ 1.42
TMEM40Q8WWA1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMEM40Q8WWA1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMEM40Q8WWA1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM40Q8WWA1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM40Q8WWA1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM40Q8WWA1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.92■■□□□ 1.42
TMEM40Q8WWA1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM40Q8WWA1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.92■■□□□ 1.42
TMEM40Q8WWA1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM40Q8WWA1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM40Q8WWA1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
TMEM40Q8WWA1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.92■■□□□ 1.42
TMEM40Q8WWA1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM40Q8WWA1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TMEM40Q8WWA1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TMEM40Q8WWA1 AC006015.1-201ENST00000429970 570 ntBASIC23.91■■□□□ 1.42
TMEM40Q8WWA1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.91■■□□□ 1.42
TMEM40Q8WWA1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.91■■□□□ 1.42
TMEM40Q8WWA1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.91■■□□□ 1.42
TMEM40Q8WWA1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TMEM40Q8WWA1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TMEM40Q8WWA1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TMEM40Q8WWA1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.91■■□□□ 1.42
TMEM40Q8WWA1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TMEM40Q8WWA1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
TMEM40Q8WWA1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TMEM40Q8WWA1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.9■■□□□ 1.42
TMEM40Q8WWA1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.9■■□□□ 1.42
TMEM40Q8WWA1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TMEM40Q8WWA1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TMEM40Q8WWA1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
TMEM40Q8WWA1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TMEM40Q8WWA1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.89■■□□□ 1.42
TMEM40Q8WWA1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.89■■□□□ 1.42
TMEM40Q8WWA1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.89■■□□□ 1.41
TMEM40Q8WWA1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.89■■□□□ 1.41
TMEM40Q8WWA1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.89■■□□□ 1.41
TMEM40Q8WWA1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
TMEM40Q8WWA1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.88■■□□□ 1.41
TMEM40Q8WWA1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.88■■□□□ 1.41
TMEM40Q8WWA1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
TMEM40Q8WWA1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TMEM40Q8WWA1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
TMEM40Q8WWA1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
TMEM40Q8WWA1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
TMEM40Q8WWA1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
TMEM40Q8WWA1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TMEM40Q8WWA1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
TMEM40Q8WWA1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TMEM40Q8WWA1 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.87■■□□□ 1.41
TMEM40Q8WWA1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.87■■□□□ 1.41
TMEM40Q8WWA1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
TMEM40Q8WWA1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TMEM40Q8WWA1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TMEM40Q8WWA1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
TMEM40Q8WWA1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
TMEM40Q8WWA1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TMEM40Q8WWA1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TMEM40Q8WWA1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TMEM40Q8WWA1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TMEM40Q8WWA1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.86■■□□□ 1.41
TMEM40Q8WWA1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TMEM40Q8WWA1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TMEM40Q8WWA1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.86■■□□□ 1.41
TMEM40Q8WWA1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
TMEM40Q8WWA1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TMEM40Q8WWA1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TMEM40Q8WWA1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.85■■□□□ 1.41
TMEM40Q8WWA1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TMEM40Q8WWA1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TMEM40Q8WWA1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMEM40Q8WWA1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMEM40Q8WWA1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
TMEM40Q8WWA1 AC137761.2-201ENST00000561729 223 ntBASIC23.85■■□□□ 1.41
TMEM40Q8WWA1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.85■■□□□ 1.41
TMEM40Q8WWA1 AC145350.3-201ENST00000569033 163 ntBASIC23.85■■□□□ 1.41
TMEM40Q8WWA1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TMEM40Q8WWA1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMEM40Q8WWA1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM40Q8WWA1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.84■■□□□ 1.41
TMEM40Q8WWA1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TMEM40Q8WWA1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.84■■□□□ 1.41
TMEM40Q8WWA1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TMEM40Q8WWA1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.84■■□□□ 1.41
TMEM40Q8WWA1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.84■■□□□ 1.41
TMEM40Q8WWA1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.84■■□□□ 1.41
TMEM40Q8WWA1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM40Q8WWA1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms