Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 LINC00526-201ENST00000581067 1875 ntBASIC22.24■■□□□ 1.15
CHD5Q8TDI0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CHD5Q8TDI0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CHD5Q8TDI0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CHD5Q8TDI0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CHD5Q8TDI0 TPRG1LP1-201ENST00000598702 760 ntBASIC22.24■■□□□ 1.15
CHD5Q8TDI0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CHD5Q8TDI0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CHD5Q8TDI0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CHD5Q8TDI0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHD5Q8TDI0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.23■■□□□ 1.15
CHD5Q8TDI0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CHD5Q8TDI0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
CHD5Q8TDI0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CHD5Q8TDI0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHD5Q8TDI0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHD5Q8TDI0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CHD5Q8TDI0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CHD5Q8TDI0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.23■■□□□ 1.15
CHD5Q8TDI0 AL358852.1-201ENST00000623174 1268 ntBASIC22.23■■□□□ 1.15
CHD5Q8TDI0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CHD5Q8TDI0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CHD5Q8TDI0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
CHD5Q8TDI0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CHD5Q8TDI0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHD5Q8TDI0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
CHD5Q8TDI0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.22■■□□□ 1.15
CHD5Q8TDI0 ESRRAP2-201ENST00000418437 1549 ntBASIC22.22■■□□□ 1.15
CHD5Q8TDI0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHD5Q8TDI0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CHD5Q8TDI0 AC139530.1-201ENST00000575312 1977 ntBASIC22.21■■□□□ 1.15
CHD5Q8TDI0 AC012676.1-201ENST00000574705 1949 ntBASIC22.21■■□□□ 1.15
CHD5Q8TDI0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CHD5Q8TDI0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CHD5Q8TDI0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.21■■□□□ 1.15
CHD5Q8TDI0 AC137767.1-201ENST00000602918 1920 ntBASIC22.21■■□□□ 1.15
CHD5Q8TDI0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHD5Q8TDI0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.21■■□□□ 1.15
CHD5Q8TDI0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CHD5Q8TDI0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHD5Q8TDI0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.21■■□□□ 1.15
CHD5Q8TDI0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.21■■□□□ 1.15
CHD5Q8TDI0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.21■■□□□ 1.15
CHD5Q8TDI0 AL354811.1-201ENST00000610286 706 ntBASIC22.21■■□□□ 1.15
CHD5Q8TDI0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.21■■□□□ 1.15
CHD5Q8TDI0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CHD5Q8TDI0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHD5Q8TDI0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
CHD5Q8TDI0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CHD5Q8TDI0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.2■■□□□ 1.14
CHD5Q8TDI0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.2■■□□□ 1.14
CHD5Q8TDI0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHD5Q8TDI0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHD5Q8TDI0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHD5Q8TDI0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.2■■□□□ 1.14
CHD5Q8TDI0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD5Q8TDI0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.19■■□□□ 1.14
CHD5Q8TDI0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD5Q8TDI0 SMUG1P1-201ENST00000590640 811 ntBASIC22.19■■□□□ 1.14
CHD5Q8TDI0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.19■■□□□ 1.14
CHD5Q8TDI0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD5Q8TDI0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
CHD5Q8TDI0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CHD5Q8TDI0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD5Q8TDI0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD5Q8TDI0 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.19■■□□□ 1.14
CHD5Q8TDI0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD5Q8TDI0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHD5Q8TDI0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHD5Q8TDI0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHD5Q8TDI0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.18■■□□□ 1.14
CHD5Q8TDI0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.18■■□□□ 1.14
CHD5Q8TDI0 AC079089.2-201ENST00000531211 1277 ntBASIC22.18■■□□□ 1.14
CHD5Q8TDI0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.18■■□□□ 1.14
CHD5Q8TDI0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.18■■□□□ 1.14
CHD5Q8TDI0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.18■■□□□ 1.14
CHD5Q8TDI0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHD5Q8TDI0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CHD5Q8TDI0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.18■■□□□ 1.14
CHD5Q8TDI0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHD5Q8TDI0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.18■■□□□ 1.14
CHD5Q8TDI0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHD5Q8TDI0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.18■■□□□ 1.14
CHD5Q8TDI0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHD5Q8TDI0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHD5Q8TDI0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHD5Q8TDI0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.17■■□□□ 1.14
CHD5Q8TDI0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHD5Q8TDI0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
CHD5Q8TDI0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
CHD5Q8TDI0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CHD5Q8TDI0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHD5Q8TDI0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.17■■□□□ 1.14
CHD5Q8TDI0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CHD5Q8TDI0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.16■■□□□ 1.14
CHD5Q8TDI0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHD5Q8TDI0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHD5Q8TDI0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHD5Q8TDI0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.16■■□□□ 1.14
CHD5Q8TDI0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms