Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SLC17A8Q8NDX2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.52■■□□□ 1.52
SLC17A8Q8NDX2 AC006015.1-201ENST00000429970 570 ntBASIC24.52■■□□□ 1.52
SLC17A8Q8NDX2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.52■■□□□ 1.52
SLC17A8Q8NDX2 MIR4651-201ENST00000582622 73 ntBASIC24.52■■□□□ 1.52
SLC17A8Q8NDX2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.52■■□□□ 1.52
SLC17A8Q8NDX2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
SLC17A8Q8NDX2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.52■■□□□ 1.52
SLC17A8Q8NDX2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SLC17A8Q8NDX2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
SLC17A8Q8NDX2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 BX842568.3-201ENST00000418104 571 ntBASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.51■■□□□ 1.51
SLC17A8Q8NDX2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SLC17A8Q8NDX2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SLC17A8Q8NDX2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
SLC17A8Q8NDX2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
SLC17A8Q8NDX2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.5■■□□□ 1.51
SLC17A8Q8NDX2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.5■■□□□ 1.51
SLC17A8Q8NDX2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.49■■□□□ 1.51
SLC17A8Q8NDX2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SLC17A8Q8NDX2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SLC17A8Q8NDX2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SLC17A8Q8NDX2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SLC17A8Q8NDX2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SLC17A8Q8NDX2 CROCCP5-201ENST00000436658 830 ntBASIC24.49■■□□□ 1.51
SLC17A8Q8NDX2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SLC17A8Q8NDX2 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.49■■□□□ 1.51
SLC17A8Q8NDX2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.49■■□□□ 1.51
SLC17A8Q8NDX2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
SLC17A8Q8NDX2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.49■■□□□ 1.51
SLC17A8Q8NDX2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SLC17A8Q8NDX2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SLC17A8Q8NDX2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SLC17A8Q8NDX2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SLC17A8Q8NDX2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SLC17A8Q8NDX2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SLC17A8Q8NDX2 AC006455.2-201ENST00000429931 906 ntBASIC24.48■■□□□ 1.51
SLC17A8Q8NDX2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.48■■□□□ 1.51
SLC17A8Q8NDX2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.48■■□□□ 1.51
SLC17A8Q8NDX2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.48■■□□□ 1.51
SLC17A8Q8NDX2 MIR6084-201ENST00000622012 110 ntBASIC24.48■■□□□ 1.51
SLC17A8Q8NDX2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SLC17A8Q8NDX2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SLC17A8Q8NDX2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SLC17A8Q8NDX2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SLC17A8Q8NDX2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
SLC17A8Q8NDX2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SLC17A8Q8NDX2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.47■■□□□ 1.51
SLC17A8Q8NDX2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SLC17A8Q8NDX2 GPX1P1-201ENST00000388829 606 ntBASIC24.47■■□□□ 1.51
SLC17A8Q8NDX2 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.47■■□□□ 1.51
SLC17A8Q8NDX2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.47■■□□□ 1.51
SLC17A8Q8NDX2 pRNA.6-201ENST00000610482 90 ntBASIC24.47■■□□□ 1.51
SLC17A8Q8NDX2 pRNA.5-201ENST00000612139 90 ntBASIC24.47■■□□□ 1.51
SLC17A8Q8NDX2 pRNA.11-201ENST00000618423 90 ntBASIC24.47■■□□□ 1.51
SLC17A8Q8NDX2 pRNA.13-201ENST00000619112 90 ntBASIC24.47■■□□□ 1.51
SLC17A8Q8NDX2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.47■■□□□ 1.51
SLC17A8Q8NDX2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SLC17A8Q8NDX2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
SLC17A8Q8NDX2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
SLC17A8Q8NDX2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.46■■□□□ 1.51
SLC17A8Q8NDX2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.46■■□□□ 1.51
SLC17A8Q8NDX2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
SLC17A8Q8NDX2 AC126544.1-201ENST00000580842 1059 ntBASIC24.46■■□□□ 1.51
SLC17A8Q8NDX2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.46■■□□□ 1.51
SLC17A8Q8NDX2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SLC17A8Q8NDX2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SLC17A8Q8NDX2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SLC17A8Q8NDX2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SLC17A8Q8NDX2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SLC17A8Q8NDX2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.45■■□□□ 1.5
SLC17A8Q8NDX2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.45■■□□□ 1.5
SLC17A8Q8NDX2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SLC17A8Q8NDX2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SLC17A8Q8NDX2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SLC17A8Q8NDX2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC24.45■■□□□ 1.5
SLC17A8Q8NDX2 MIR3181-201ENST00000578512 73 ntBASIC24.45■■□□□ 1.5
SLC17A8Q8NDX2 SMUG1P1-201ENST00000590640 811 ntBASIC24.45■■□□□ 1.5
SLC17A8Q8NDX2 AC136469.2-201ENST00000623944 1028 ntBASIC24.45■■□□□ 1.5
SLC17A8Q8NDX2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms