Protein–RNA interactions for Protein: Q8N0S2

SYCE1, Synaptonemal complex central element protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1Q8N0S2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.04■■□□□ 1.28
SYCE1Q8N0S2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SYCE1Q8N0S2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SYCE1Q8N0S2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SYCE1Q8N0S2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.04■■□□□ 1.28
SYCE1Q8N0S2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
SYCE1Q8N0S2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.04■■□□□ 1.28
SYCE1Q8N0S2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SYCE1Q8N0S2 KRT125P-201ENST00000546827 989 ntBASIC23.04■■□□□ 1.28
SYCE1Q8N0S2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
SYCE1Q8N0S2 MTDHP2-201ENST00000601468 714 ntBASIC23.04■■□□□ 1.28
SYCE1Q8N0S2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.04■■□□□ 1.28
SYCE1Q8N0S2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SYCE1Q8N0S2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
SYCE1Q8N0S2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SYCE1Q8N0S2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SYCE1Q8N0S2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.03■■□□□ 1.28
SYCE1Q8N0S2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.03■■□□□ 1.28
SYCE1Q8N0S2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
SYCE1Q8N0S2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SYCE1Q8N0S2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.03■■□□□ 1.28
SYCE1Q8N0S2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.03■■□□□ 1.28
SYCE1Q8N0S2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.03■■□□□ 1.28
SYCE1Q8N0S2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SYCE1Q8N0S2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.03■■□□□ 1.28
SYCE1Q8N0S2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SYCE1Q8N0S2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SYCE1Q8N0S2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.03■■□□□ 1.28
SYCE1Q8N0S2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.02■■□□□ 1.28
SYCE1Q8N0S2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SYCE1Q8N0S2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SYCE1Q8N0S2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
SYCE1Q8N0S2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SYCE1Q8N0S2 Z92544.1-202ENST00000571933 1220 ntBASIC23.02■■□□□ 1.28
SYCE1Q8N0S2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SYCE1Q8N0S2 AC026310.3-201ENST00000625186 2373 ntBASIC23.02■■□□□ 1.28
SYCE1Q8N0S2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SYCE1Q8N0S2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
SYCE1Q8N0S2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.02■■□□□ 1.28
SYCE1Q8N0S2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.02■■□□□ 1.28
SYCE1Q8N0S2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.02■■□□□ 1.28
SYCE1Q8N0S2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
SYCE1Q8N0S2 C17orf82-201ENST00000623772 1530 ntBASIC23.02■■□□□ 1.28
SYCE1Q8N0S2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SYCE1Q8N0S2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
SYCE1Q8N0S2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
SYCE1Q8N0S2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SYCE1Q8N0S2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
SYCE1Q8N0S2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SYCE1Q8N0S2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SYCE1Q8N0S2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.01■■□□□ 1.27
SYCE1Q8N0S2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SYCE1Q8N0S2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SYCE1Q8N0S2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SYCE1Q8N0S2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
SYCE1Q8N0S2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
SYCE1Q8N0S2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23■■□□□ 1.27
SYCE1Q8N0S2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23■■□□□ 1.27
SYCE1Q8N0S2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SYCE1Q8N0S2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
SYCE1Q8N0S2 CD72-202ENST00000378430 585 ntTSL 3 BASIC23■■□□□ 1.27
SYCE1Q8N0S2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23■■□□□ 1.27
SYCE1Q8N0S2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
SYCE1Q8N0S2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23■■□□□ 1.27
SYCE1Q8N0S2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SYCE1Q8N0S2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SYCE1Q8N0S2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SYCE1Q8N0S2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SYCE1Q8N0S2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SYCE1Q8N0S2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
SYCE1Q8N0S2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
SYCE1Q8N0S2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.99■■□□□ 1.27
SYCE1Q8N0S2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SYCE1Q8N0S2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SYCE1Q8N0S2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SYCE1Q8N0S2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SYCE1Q8N0S2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.99■■□□□ 1.27
SYCE1Q8N0S2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SYCE1Q8N0S2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SYCE1Q8N0S2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SYCE1Q8N0S2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.99■■□□□ 1.27
SYCE1Q8N0S2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
SYCE1Q8N0S2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SYCE1Q8N0S2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
SYCE1Q8N0S2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.98■■□□□ 1.27
SYCE1Q8N0S2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SYCE1Q8N0S2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SYCE1Q8N0S2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SYCE1Q8N0S2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SYCE1Q8N0S2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
SYCE1Q8N0S2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.98■■□□□ 1.27
SYCE1Q8N0S2 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.98■■□□□ 1.27
SYCE1Q8N0S2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
SYCE1Q8N0S2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SYCE1Q8N0S2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SYCE1Q8N0S2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SYCE1Q8N0S2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.97■■□□□ 1.27
SYCE1Q8N0S2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SYCE1Q8N0S2 AC244015.2-201ENST00000616358 1861 ntBASIC22.97■■□□□ 1.27
SYCE1Q8N0S2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms