Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.21■□□□□ 0.83
C9orf40Q8IXQ3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.21■□□□□ 0.83
C9orf40Q8IXQ3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.21■□□□□ 0.83
C9orf40Q8IXQ3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.21■□□□□ 0.83
C9orf40Q8IXQ3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.21■□□□□ 0.83
C9orf40Q8IXQ3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
C9orf40Q8IXQ3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C9orf40Q8IXQ3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
C9orf40Q8IXQ3 AC068473.5-201ENST00000616428 2072 ntBASIC20.2■□□□□ 0.82
C9orf40Q8IXQ3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
C9orf40Q8IXQ3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
C9orf40Q8IXQ3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C9orf40Q8IXQ3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
C9orf40Q8IXQ3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.2■□□□□ 0.82
C9orf40Q8IXQ3 OXCT2P1-201ENST00000447263 1535 ntBASIC20.2■□□□□ 0.82
C9orf40Q8IXQ3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.2■□□□□ 0.82
C9orf40Q8IXQ3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
C9orf40Q8IXQ3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C9orf40Q8IXQ3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf40Q8IXQ3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
C9orf40Q8IXQ3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf40Q8IXQ3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
C9orf40Q8IXQ3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
C9orf40Q8IXQ3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf40Q8IXQ3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf40Q8IXQ3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf40Q8IXQ3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
C9orf40Q8IXQ3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.19■□□□□ 0.82
C9orf40Q8IXQ3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf40Q8IXQ3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf40Q8IXQ3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf40Q8IXQ3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf40Q8IXQ3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf40Q8IXQ3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.19■□□□□ 0.82
C9orf40Q8IXQ3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf40Q8IXQ3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf40Q8IXQ3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.19■□□□□ 0.82
C9orf40Q8IXQ3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf40Q8IXQ3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf40Q8IXQ3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
C9orf40Q8IXQ3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf40Q8IXQ3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf40Q8IXQ3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
C9orf40Q8IXQ3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf40Q8IXQ3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf40Q8IXQ3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf40Q8IXQ3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf40Q8IXQ3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.18■□□□□ 0.82
C9orf40Q8IXQ3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf40Q8IXQ3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf40Q8IXQ3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
C9orf40Q8IXQ3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf40Q8IXQ3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.17■□□□□ 0.82
C9orf40Q8IXQ3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf40Q8IXQ3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.17■□□□□ 0.82
C9orf40Q8IXQ3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf40Q8IXQ3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
C9orf40Q8IXQ3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf40Q8IXQ3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.17■□□□□ 0.82
C9orf40Q8IXQ3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf40Q8IXQ3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C9orf40Q8IXQ3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.16■□□□□ 0.82
C9orf40Q8IXQ3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
C9orf40Q8IXQ3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.16■□□□□ 0.82
C9orf40Q8IXQ3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C9orf40Q8IXQ3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C9orf40Q8IXQ3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C9orf40Q8IXQ3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
C9orf40Q8IXQ3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C9orf40Q8IXQ3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
C9orf40Q8IXQ3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.16■□□□□ 0.82
C9orf40Q8IXQ3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.16■□□□□ 0.82
C9orf40Q8IXQ3 AC105233.4-201ENST00000642045 216 ntBASIC20.16■□□□□ 0.82
C9orf40Q8IXQ3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C9orf40Q8IXQ3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C9orf40Q8IXQ3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
C9orf40Q8IXQ3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.16■□□□□ 0.82
C9orf40Q8IXQ3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C9orf40Q8IXQ3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
C9orf40Q8IXQ3 AC137767.1-201ENST00000602918 1920 ntBASIC20.15■□□□□ 0.82
C9orf40Q8IXQ3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
C9orf40Q8IXQ3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.15■□□□□ 0.82
C9orf40Q8IXQ3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.15■□□□□ 0.82
C9orf40Q8IXQ3 AC012414.1-201ENST00000556676 535 ntBASIC20.15■□□□□ 0.82
C9orf40Q8IXQ3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.15■□□□□ 0.82
C9orf40Q8IXQ3 ESRRAP2-201ENST00000418437 1549 ntBASIC20.15■□□□□ 0.82
C9orf40Q8IXQ3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
C9orf40Q8IXQ3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
C9orf40Q8IXQ3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
C9orf40Q8IXQ3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.14■□□□□ 0.81
C9orf40Q8IXQ3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
C9orf40Q8IXQ3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
C9orf40Q8IXQ3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
C9orf40Q8IXQ3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
C9orf40Q8IXQ3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
C9orf40Q8IXQ3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
C9orf40Q8IXQ3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
C9orf40Q8IXQ3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
C9orf40Q8IXQ3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.14■□□□□ 0.81
C9orf40Q8IXQ3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms