Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
UBR1Q8IWV7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
UBR1Q8IWV7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
UBR1Q8IWV7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
UBR1Q8IWV7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
UBR1Q8IWV7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
UBR1Q8IWV7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC31.61■■■□□ 2.65
UBR1Q8IWV7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
UBR1Q8IWV7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC31.61■■■□□ 2.65
UBR1Q8IWV7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC31.6■■■□□ 2.65
UBR1Q8IWV7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC31.6■■■□□ 2.65
UBR1Q8IWV7 ITM2C-210ENST00000620962 501 ntBASIC31.6■■■□□ 2.65
UBR1Q8IWV7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
UBR1Q8IWV7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
UBR1Q8IWV7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
UBR1Q8IWV7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
UBR1Q8IWV7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
UBR1Q8IWV7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
UBR1Q8IWV7 AF201337.1-201ENST00000520239 748 ntBASIC31.59■■■□□ 2.65
UBR1Q8IWV7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC31.59■■■□□ 2.65
UBR1Q8IWV7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC31.59■■■□□ 2.65
UBR1Q8IWV7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC31.59■■■□□ 2.65
UBR1Q8IWV7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
UBR1Q8IWV7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
UBR1Q8IWV7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC31.58■■■□□ 2.65
UBR1Q8IWV7 AC022211.4-201ENST00000625094 2161 ntBASIC31.58■■■□□ 2.65
UBR1Q8IWV7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
UBR1Q8IWV7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC31.58■■■□□ 2.65
UBR1Q8IWV7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
UBR1Q8IWV7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
UBR1Q8IWV7 POU5F1P3-201ENST00000428824 1078 ntBASIC31.58■■■□□ 2.65
UBR1Q8IWV7 APTR-203ENST00000430801 583 ntTSL 5 BASIC31.58■■■□□ 2.65
UBR1Q8IWV7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC31.57■■■□□ 2.65
UBR1Q8IWV7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
UBR1Q8IWV7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
UBR1Q8IWV7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
UBR1Q8IWV7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
UBR1Q8IWV7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
UBR1Q8IWV7 FAM201B-201ENST00000458407 597 ntBASIC31.57■■■□□ 2.64
UBR1Q8IWV7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
UBR1Q8IWV7 AC133552.2-202ENST00000575694 574 ntBASIC31.56■■■□□ 2.64
UBR1Q8IWV7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
UBR1Q8IWV7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC31.56■■■□□ 2.64
UBR1Q8IWV7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC31.56■■■□□ 2.64
UBR1Q8IWV7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC31.55■■■□□ 2.64
UBR1Q8IWV7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC31.55■■■□□ 2.64
UBR1Q8IWV7 AC098590.1-201ENST00000468126 897 ntBASIC31.55■■■□□ 2.64
UBR1Q8IWV7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC31.55■■■□□ 2.64
UBR1Q8IWV7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
UBR1Q8IWV7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
UBR1Q8IWV7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
UBR1Q8IWV7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
UBR1Q8IWV7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
UBR1Q8IWV7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
UBR1Q8IWV7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
UBR1Q8IWV7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC31.54■■■□□ 2.64
UBR1Q8IWV7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
UBR1Q8IWV7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
UBR1Q8IWV7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
UBR1Q8IWV7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
UBR1Q8IWV7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
UBR1Q8IWV7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
UBR1Q8IWV7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
UBR1Q8IWV7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC31.53■■■□□ 2.64
UBR1Q8IWV7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC31.53■■■□□ 2.64
UBR1Q8IWV7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC31.52■■■□□ 2.64
UBR1Q8IWV7 CYP2T1P-201ENST00000432607 1285 ntBASIC31.52■■■□□ 2.64
UBR1Q8IWV7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
UBR1Q8IWV7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC31.52■■■□□ 2.64
UBR1Q8IWV7 AC133041.1-202ENST00000642053 222 ntBASIC31.52■■■□□ 2.64
UBR1Q8IWV7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC31.52■■■□□ 2.64
UBR1Q8IWV7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
UBR1Q8IWV7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC31.52■■■□□ 2.64
UBR1Q8IWV7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
UBR1Q8IWV7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC31.52■■■□□ 2.64
UBR1Q8IWV7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC31.52■■■□□ 2.64
UBR1Q8IWV7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC31.52■■■□□ 2.64
UBR1Q8IWV7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
UBR1Q8IWV7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
UBR1Q8IWV7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
UBR1Q8IWV7 RPS2P52-201ENST00000469610 820 ntBASIC31.51■■■□□ 2.63
UBR1Q8IWV7 MARS-234ENST00000630571 216 ntTSL 5 BASIC31.51■■■□□ 2.63
UBR1Q8IWV7 MARS-235ENST00000630803 183 ntTSL 3 BASIC31.51■■■□□ 2.63
UBR1Q8IWV7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
UBR1Q8IWV7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
UBR1Q8IWV7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
UBR1Q8IWV7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
UBR1Q8IWV7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC31.5■■■□□ 2.63
UBR1Q8IWV7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC31.5■■■□□ 2.63
UBR1Q8IWV7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC31.5■■■□□ 2.63
UBR1Q8IWV7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
UBR1Q8IWV7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
UBR1Q8IWV7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC31.5■■■□□ 2.63
UBR1Q8IWV7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
UBR1Q8IWV7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC31.49■■■□□ 2.63
UBR1Q8IWV7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
UBR1Q8IWV7 OXCT2P1-201ENST00000447263 1535 ntBASIC31.49■■■□□ 2.63
UBR1Q8IWV7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
UBR1Q8IWV7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
UBR1Q8IWV7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC31.49■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms