Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.13■■□□□ 1.29
RNF135Q8IUD6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF135Q8IUD6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RNF135Q8IUD6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF135Q8IUD6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RNF135Q8IUD6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RNF135Q8IUD6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RNF135Q8IUD6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF135Q8IUD6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
RNF135Q8IUD6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.12■■□□□ 1.29
RNF135Q8IUD6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RNF135Q8IUD6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.12■■□□□ 1.29
RNF135Q8IUD6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.12■■□□□ 1.29
RNF135Q8IUD6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF135Q8IUD6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.11■■□□□ 1.29
RNF135Q8IUD6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
RNF135Q8IUD6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.11■■□□□ 1.29
RNF135Q8IUD6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RNF135Q8IUD6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.11■■□□□ 1.29
RNF135Q8IUD6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
RNF135Q8IUD6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RNF135Q8IUD6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.11■■□□□ 1.29
RNF135Q8IUD6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RNF135Q8IUD6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RNF135Q8IUD6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.11■■□□□ 1.29
RNF135Q8IUD6 DUX4L4-201ENST00000566884 1269 ntBASIC23.11■■□□□ 1.29
RNF135Q8IUD6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RNF135Q8IUD6 TPRG1LP1-201ENST00000598702 760 ntBASIC23.11■■□□□ 1.29
RNF135Q8IUD6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RNF135Q8IUD6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.1■■□□□ 1.29
RNF135Q8IUD6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
RNF135Q8IUD6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.1■■□□□ 1.29
RNF135Q8IUD6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RNF135Q8IUD6 AC093827.2-201ENST00000512654 315 ntBASIC23.1■■□□□ 1.29
RNF135Q8IUD6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.1■■□□□ 1.29
RNF135Q8IUD6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
RNF135Q8IUD6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
RNF135Q8IUD6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RNF135Q8IUD6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
RNF135Q8IUD6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF135Q8IUD6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF135Q8IUD6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF135Q8IUD6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
RNF135Q8IUD6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
RNF135Q8IUD6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF135Q8IUD6 KRT19P1-201ENST00000405746 1186 ntBASIC23.09■■□□□ 1.29
RNF135Q8IUD6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.09■■□□□ 1.29
RNF135Q8IUD6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.08■■□□□ 1.29
RNF135Q8IUD6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RNF135Q8IUD6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RNF135Q8IUD6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF135Q8IUD6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF135Q8IUD6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF135Q8IUD6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
RNF135Q8IUD6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RNF135Q8IUD6 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.08■■□□□ 1.29
RNF135Q8IUD6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
RNF135Q8IUD6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RNF135Q8IUD6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF135Q8IUD6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RNF135Q8IUD6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.08■■□□□ 1.28
RNF135Q8IUD6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
RNF135Q8IUD6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.07■■□□□ 1.28
RNF135Q8IUD6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF135Q8IUD6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
RNF135Q8IUD6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.07■■□□□ 1.28
RNF135Q8IUD6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF135Q8IUD6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.07■■□□□ 1.28
RNF135Q8IUD6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.07■■□□□ 1.28
RNF135Q8IUD6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.07■■□□□ 1.28
RNF135Q8IUD6 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.07■■□□□ 1.28
RNF135Q8IUD6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF135Q8IUD6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.07■■□□□ 1.28
RNF135Q8IUD6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF135Q8IUD6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RNF135Q8IUD6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF135Q8IUD6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.06■■□□□ 1.28
RNF135Q8IUD6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.06■■□□□ 1.28
RNF135Q8IUD6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RNF135Q8IUD6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF135Q8IUD6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
RNF135Q8IUD6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.06■■□□□ 1.28
RNF135Q8IUD6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.06■■□□□ 1.28
RNF135Q8IUD6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF135Q8IUD6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RNF135Q8IUD6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RNF135Q8IUD6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF135Q8IUD6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
RNF135Q8IUD6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.05■■□□□ 1.28
RNF135Q8IUD6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.05■■□□□ 1.28
RNF135Q8IUD6 KRT18P11-201ENST00000435214 1283 ntBASIC23.05■■□□□ 1.28
RNF135Q8IUD6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.05■■□□□ 1.28
RNF135Q8IUD6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.05■■□□□ 1.28
RNF135Q8IUD6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.05■■□□□ 1.28
RNF135Q8IUD6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.05■■□□□ 1.28
RNF135Q8IUD6 MIR4651-201ENST00000582622 73 ntBASIC23.05■■□□□ 1.28
RNF135Q8IUD6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF135Q8IUD6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.05■■□□□ 1.28
RNF135Q8IUD6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.05■■□□□ 1.28
RNF135Q8IUD6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms