Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP1BQ7LBR1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP1BQ7LBR1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.97■□□□□ 0.79
CHMP1BQ7LBR1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP1BQ7LBR1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP1BQ7LBR1 AC133637.1-201ENST00000624115 1537 ntBASIC19.97■□□□□ 0.79
CHMP1BQ7LBR1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 AP001330.3-201ENST00000520123 633 ntBASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 AL031432.3-201ENST00000607698 485 ntBASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 AL136967.2-201ENST00000623968 743 ntBASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP1BQ7LBR1 RASA4CP-201ENST00000424092 1398 ntBASIC19.95■□□□□ 0.79
CHMP1BQ7LBR1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CHMP1BQ7LBR1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CHMP1BQ7LBR1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CHMP1BQ7LBR1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
CHMP1BQ7LBR1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP1BQ7LBR1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP1BQ7LBR1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.95■□□□□ 0.78
CHMP1BQ7LBR1 MIR939-201ENST00000401314 82 ntBASIC19.95■□□□□ 0.78
CHMP1BQ7LBR1 BX842568.3-201ENST00000418104 571 ntBASIC19.95■□□□□ 0.78
CHMP1BQ7LBR1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CHMP1BQ7LBR1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP1BQ7LBR1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.95■□□□□ 0.78
CHMP1BQ7LBR1 AL499627.2-201ENST00000606283 725 ntBASIC19.95■□□□□ 0.78
CHMP1BQ7LBR1 AC233992.3-201ENST00000607491 485 ntBASIC19.95■□□□□ 0.78
CHMP1BQ7LBR1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP1BQ7LBR1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP1BQ7LBR1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
CHMP1BQ7LBR1 AC079630.1-202ENST00000618127 1840 ntBASIC19.95■□□□□ 0.78
CHMP1BQ7LBR1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.95■□□□□ 0.78
CHMP1BQ7LBR1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CHMP1BQ7LBR1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHMP1BQ7LBR1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.94■□□□□ 0.78
CHMP1BQ7LBR1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP1BQ7LBR1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP1BQ7LBR1 AC099791.1-201ENST00000416440 715 ntBASIC19.94■□□□□ 0.78
CHMP1BQ7LBR1 AC126544.1-201ENST00000580842 1059 ntBASIC19.94■□□□□ 0.78
CHMP1BQ7LBR1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP1BQ7LBR1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP1BQ7LBR1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP1BQ7LBR1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP1BQ7LBR1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CHMP1BQ7LBR1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
CHMP1BQ7LBR1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.94■□□□□ 0.78
CHMP1BQ7LBR1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CHMP1BQ7LBR1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.93■□□□□ 0.78
CHMP1BQ7LBR1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP1BQ7LBR1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP1BQ7LBR1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP1BQ7LBR1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP1BQ7LBR1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.93■□□□□ 0.78
CHMP1BQ7LBR1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
CHMP1BQ7LBR1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
CHMP1BQ7LBR1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP1BQ7LBR1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP1BQ7LBR1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP1BQ7LBR1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP1BQ7LBR1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP1BQ7LBR1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CHMP1BQ7LBR1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP1BQ7LBR1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.92■□□□□ 0.78
CHMP1BQ7LBR1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP1BQ7LBR1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP1BQ7LBR1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP1BQ7LBR1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.92■□□□□ 0.78
CHMP1BQ7LBR1 CA15P2-201ENST00000611168 834 ntBASIC19.92■□□□□ 0.78
CHMP1BQ7LBR1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CHMP1BQ7LBR1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP1BQ7LBR1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP1BQ7LBR1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP1BQ7LBR1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.91■□□□□ 0.78
CHMP1BQ7LBR1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CHMP1BQ7LBR1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.91■□□□□ 0.78
CHMP1BQ7LBR1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP1BQ7LBR1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP1BQ7LBR1 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.91■□□□□ 0.78
CHMP1BQ7LBR1 AC105265.2-201ENST00000467189 838 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms