Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ARFGEF3Q5TH69 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.6■□□□□ 0.57
ARFGEF3Q5TH69 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ARFGEF3Q5TH69 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ARFGEF3Q5TH69 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.59■□□□□ 0.57
ARFGEF3Q5TH69 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.59■□□□□ 0.57
ARFGEF3Q5TH69 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ARFGEF3Q5TH69 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ARFGEF3Q5TH69 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
ARFGEF3Q5TH69 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARFGEF3Q5TH69 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARFGEF3Q5TH69 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
ARFGEF3Q5TH69 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARFGEF3Q5TH69 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ARFGEF3Q5TH69 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.59■□□□□ 0.57
ARFGEF3Q5TH69 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ARFGEF3Q5TH69 AC105233.4-201ENST00000642045 216 ntBASIC18.59■□□□□ 0.57
ARFGEF3Q5TH69 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ARFGEF3Q5TH69 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARFGEF3Q5TH69 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.59■□□□□ 0.57
ARFGEF3Q5TH69 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ARFGEF3Q5TH69 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARFGEF3Q5TH69 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.58■□□□□ 0.57
ARFGEF3Q5TH69 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.58■□□□□ 0.57
ARFGEF3Q5TH69 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.58■□□□□ 0.57
ARFGEF3Q5TH69 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.58■□□□□ 0.57
ARFGEF3Q5TH69 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARFGEF3Q5TH69 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARFGEF3Q5TH69 BX005040.4-201ENST00000637145 1518 ntBASIC18.58■□□□□ 0.56
ARFGEF3Q5TH69 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.58■□□□□ 0.56
ARFGEF3Q5TH69 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.58■□□□□ 0.56
ARFGEF3Q5TH69 KRT18P61-201ENST00000585825 1298 ntBASIC18.58■□□□□ 0.56
ARFGEF3Q5TH69 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ARFGEF3Q5TH69 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ARFGEF3Q5TH69 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ARFGEF3Q5TH69 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ARFGEF3Q5TH69 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ARFGEF3Q5TH69 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.57■□□□□ 0.56
ARFGEF3Q5TH69 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.57■□□□□ 0.56
ARFGEF3Q5TH69 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.57■□□□□ 0.56
ARFGEF3Q5TH69 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ARFGEF3Q5TH69 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.56■□□□□ 0.56
ARFGEF3Q5TH69 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.56■□□□□ 0.56
ARFGEF3Q5TH69 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ARFGEF3Q5TH69 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ARFGEF3Q5TH69 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ARFGEF3Q5TH69 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ARFGEF3Q5TH69 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.56■□□□□ 0.56
ARFGEF3Q5TH69 AC016769.1-201ENST00000409132 1010 ntBASIC18.56■□□□□ 0.56
ARFGEF3Q5TH69 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.56■□□□□ 0.56
ARFGEF3Q5TH69 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ARFGEF3Q5TH69 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ARFGEF3Q5TH69 DUSP8P3-201ENST00000399571 1760 ntBASIC18.56■□□□□ 0.56
ARFGEF3Q5TH69 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ARFGEF3Q5TH69 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ARFGEF3Q5TH69 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.56■□□□□ 0.56
ARFGEF3Q5TH69 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARFGEF3Q5TH69 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARFGEF3Q5TH69 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.55■□□□□ 0.56
ARFGEF3Q5TH69 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARFGEF3Q5TH69 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ARFGEF3Q5TH69 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARFGEF3Q5TH69 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARFGEF3Q5TH69 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ARFGEF3Q5TH69 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.55■□□□□ 0.56
ARFGEF3Q5TH69 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.55■□□□□ 0.56
ARFGEF3Q5TH69 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ARFGEF3Q5TH69 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARFGEF3Q5TH69 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARFGEF3Q5TH69 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARFGEF3Q5TH69 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARFGEF3Q5TH69 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.54■□□□□ 0.56
ARFGEF3Q5TH69 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARFGEF3Q5TH69 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ARFGEF3Q5TH69 SMUG1P1-201ENST00000590640 811 ntBASIC18.54■□□□□ 0.56
ARFGEF3Q5TH69 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARFGEF3Q5TH69 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARFGEF3Q5TH69 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ARFGEF3Q5TH69 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARFGEF3Q5TH69 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
ARFGEF3Q5TH69 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARFGEF3Q5TH69 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ARFGEF3Q5TH69 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ARFGEF3Q5TH69 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.54■□□□□ 0.56
ARFGEF3Q5TH69 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.54■□□□□ 0.56
ARFGEF3Q5TH69 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARFGEF3Q5TH69 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ARFGEF3Q5TH69 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.54■□□□□ 0.56
ARFGEF3Q5TH69 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.53■□□□□ 0.56
ARFGEF3Q5TH69 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.53■□□□□ 0.56
ARFGEF3Q5TH69 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARFGEF3Q5TH69 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.53■□□□□ 0.56
ARFGEF3Q5TH69 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ARFGEF3Q5TH69 RARRES2P11-201ENST00000635158 484 ntBASIC18.53■□□□□ 0.56
ARFGEF3Q5TH69 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.53■□□□□ 0.56
ARFGEF3Q5TH69 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.53■□□□□ 0.56
ARFGEF3Q5TH69 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.52■□□□□ 0.56
ARFGEF3Q5TH69 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
ARFGEF3Q5TH69 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.52■□□□□ 0.56
ARFGEF3Q5TH69 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms