Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RBM48Q5RL73 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RBM48Q5RL73 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RBM48Q5RL73 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RBM48Q5RL73 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RBM48Q5RL73 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RBM48Q5RL73 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RBM48Q5RL73 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.91■□□□□ 0.78
RBM48Q5RL73 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.91■□□□□ 0.78
RBM48Q5RL73 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RBM48Q5RL73 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RBM48Q5RL73 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.91■□□□□ 0.78
RBM48Q5RL73 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RBM48Q5RL73 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RBM48Q5RL73 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RBM48Q5RL73 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RBM48Q5RL73 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RBM48Q5RL73 AF106564.1-201ENST00000607058 2553 ntBASIC19.9■□□□□ 0.78
RBM48Q5RL73 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RBM48Q5RL73 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RBM48Q5RL73 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RBM48Q5RL73 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RBM48Q5RL73 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RBM48Q5RL73 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RBM48Q5RL73 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.9■□□□□ 0.78
RBM48Q5RL73 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RBM48Q5RL73 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.9■□□□□ 0.78
RBM48Q5RL73 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RBM48Q5RL73 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RBM48Q5RL73 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
RBM48Q5RL73 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
RBM48Q5RL73 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
RBM48Q5RL73 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RBM48Q5RL73 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.89■□□□□ 0.77
RBM48Q5RL73 AC011551.1-201ENST00000614101 683 ntBASIC19.89■□□□□ 0.77
RBM48Q5RL73 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RBM48Q5RL73 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RBM48Q5RL73 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RBM48Q5RL73 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RBM48Q5RL73 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.88■□□□□ 0.77
RBM48Q5RL73 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RBM48Q5RL73 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RBM48Q5RL73 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.88■□□□□ 0.77
RBM48Q5RL73 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RBM48Q5RL73 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.88■□□□□ 0.77
RBM48Q5RL73 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.88■□□□□ 0.77
RBM48Q5RL73 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RBM48Q5RL73 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RBM48Q5RL73 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RBM48Q5RL73 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RBM48Q5RL73 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RBM48Q5RL73 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RBM48Q5RL73 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.87■□□□□ 0.77
RBM48Q5RL73 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RBM48Q5RL73 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RBM48Q5RL73 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RBM48Q5RL73 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.87■□□□□ 0.77
RBM48Q5RL73 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.87■□□□□ 0.77
RBM48Q5RL73 LINC01960-201ENST00000563759 1884 ntBASIC19.87■□□□□ 0.77
RBM48Q5RL73 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RBM48Q5RL73 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RBM48Q5RL73 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RBM48Q5RL73 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
RBM48Q5RL73 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RBM48Q5RL73 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RBM48Q5RL73 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
RBM48Q5RL73 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RBM48Q5RL73 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RBM48Q5RL73 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RBM48Q5RL73 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RBM48Q5RL73 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RBM48Q5RL73 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.86■□□□□ 0.77
RBM48Q5RL73 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.86■□□□□ 0.77
RBM48Q5RL73 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RBM48Q5RL73 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RBM48Q5RL73 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RBM48Q5RL73 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RBM48Q5RL73 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RBM48Q5RL73 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
RBM48Q5RL73 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RBM48Q5RL73 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RBM48Q5RL73 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RBM48Q5RL73 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RBM48Q5RL73 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RBM48Q5RL73 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RBM48Q5RL73 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.85■□□□□ 0.77
RBM48Q5RL73 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.85■□□□□ 0.77
RBM48Q5RL73 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.85■□□□□ 0.77
RBM48Q5RL73 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RBM48Q5RL73 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RBM48Q5RL73 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RBM48Q5RL73 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RBM48Q5RL73 AC007952.6-201ENST00000573168 2673 ntBASIC19.85■□□□□ 0.77
RBM48Q5RL73 AC003957.1-201ENST00000625108 2673 ntBASIC19.85■□□□□ 0.77
RBM48Q5RL73 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.85■□□□□ 0.77
RBM48Q5RL73 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RBM48Q5RL73 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RBM48Q5RL73 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RBM48Q5RL73 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RBM48Q5RL73 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms