Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRIM60Q495X7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRIM60Q495X7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.22■■□□□ 1.47
TRIM60Q495X7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.22■■□□□ 1.47
TRIM60Q495X7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TRIM60Q495X7 AC008687.6-201ENST00000596318 630 ntBASIC24.22■■□□□ 1.47
TRIM60Q495X7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRIM60Q495X7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.21■■□□□ 1.47
TRIM60Q495X7 AP003733.4-201ENST00000623785 1697 ntBASIC24.21■■□□□ 1.47
TRIM60Q495X7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.21■■□□□ 1.47
TRIM60Q495X7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TRIM60Q495X7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRIM60Q495X7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
TRIM60Q495X7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRIM60Q495X7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.21■■□□□ 1.47
TRIM60Q495X7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRIM60Q495X7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
TRIM60Q495X7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRIM60Q495X7 KRT87P-202ENST00000534226 1464 ntBASIC24.2■■□□□ 1.47
TRIM60Q495X7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRIM60Q495X7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC24.2■■□□□ 1.46
TRIM60Q495X7 AC022211.4-201ENST00000625094 2161 ntBASIC24.2■■□□□ 1.46
TRIM60Q495X7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.19■■□□□ 1.46
TRIM60Q495X7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRIM60Q495X7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.19■■□□□ 1.46
TRIM60Q495X7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC24.19■■□□□ 1.46
TRIM60Q495X7 AC098934.4-201ENST00000564127 592 ntBASIC24.19■■□□□ 1.46
TRIM60Q495X7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRIM60Q495X7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TRIM60Q495X7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TRIM60Q495X7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM60Q495X7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM60Q495X7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM60Q495X7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM60Q495X7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM60Q495X7 AC133041.1-202ENST00000642053 222 ntBASIC24.18■■□□□ 1.46
TRIM60Q495X7 OXCT2P1-201ENST00000447263 1535 ntBASIC24.18■■□□□ 1.46
TRIM60Q495X7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM60Q495X7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.17■■□□□ 1.46
TRIM60Q495X7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
TRIM60Q495X7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM60Q495X7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM60Q495X7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM60Q495X7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM60Q495X7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC24.16■■□□□ 1.46
TRIM60Q495X7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM60Q495X7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.16■■□□□ 1.46
TRIM60Q495X7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.16■■□□□ 1.46
TRIM60Q495X7 MYCNOS-205ENST00000641950 531 ntBASIC24.16■■□□□ 1.46
TRIM60Q495X7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM60Q495X7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM60Q495X7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM60Q495X7 AC005224.4-201ENST00000583262 1652 ntBASIC24.15■■□□□ 1.46
TRIM60Q495X7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
TRIM60Q495X7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM60Q495X7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM60Q495X7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM60Q495X7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM60Q495X7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.15■■□□□ 1.46
TRIM60Q495X7 AF201337.1-201ENST00000520239 748 ntBASIC24.15■■□□□ 1.46
TRIM60Q495X7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM60Q495X7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.15■■□□□ 1.46
TRIM60Q495X7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
TRIM60Q495X7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM60Q495X7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM60Q495X7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM60Q495X7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM60Q495X7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
TRIM60Q495X7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.15■■□□□ 1.46
TRIM60Q495X7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
TRIM60Q495X7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
TRIM60Q495X7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
TRIM60Q495X7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.14■■□□□ 1.46
TRIM60Q495X7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRIM60Q495X7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC24.14■■□□□ 1.45
TRIM60Q495X7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TRIM60Q495X7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC24.14■■□□□ 1.45
TRIM60Q495X7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.14■■□□□ 1.45
TRIM60Q495X7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
TRIM60Q495X7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRIM60Q495X7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
TRIM60Q495X7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.14■■□□□ 1.45
TRIM60Q495X7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM60Q495X7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM60Q495X7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.13■■□□□ 1.45
TRIM60Q495X7 AC073210.2-201ENST00000430369 194 ntBASIC24.13■■□□□ 1.45
TRIM60Q495X7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
TRIM60Q495X7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
TRIM60Q495X7 AC105036.2-201ENST00000569468 176 ntBASIC24.13■■□□□ 1.45
TRIM60Q495X7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.13■■□□□ 1.45
TRIM60Q495X7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM60Q495X7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM60Q495X7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM60Q495X7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM60Q495X7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM60Q495X7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.13■■□□□ 1.45
TRIM60Q495X7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM60Q495X7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM60Q495X7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM60Q495X7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms