Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 SMP3YOR149C 1551 nt3.9□□□□□ -1.78
RUP1Q12242 PHO87YCR037C 2772 nt3.9□□□□□ -1.78
RUP1Q12242 TMA17YDL110C 453 nt3.9□□□□□ -1.79
RUP1Q12242 ATP5YDR298C 639 nt3.9□□□□□ -1.79
RUP1Q12242 tL(UAG)JtL(UAG)J 82 nt3.9□□□□□ -1.79
RUP1Q12242 tL(UAG)L1tL(UAG)L1 82 nt3.9□□□□□ -1.79
RUP1Q12242 tL(UAG)L2tL(UAG)L2 82 nt3.9□□□□□ -1.79
RUP1Q12242 PEX21YGR239C 867 nt3.9□□□□□ -1.79
RUP1Q12242 YIL025CYIL025C 375 nt3.9□□□□□ -1.79
RUP1Q12242 YJL028WYJL028W 336 nt3.9□□□□□ -1.79
RUP1Q12242 SOP4YJL192C 705 nt3.9□□□□□ -1.79
RUP1Q12242 PNT1YOR266W 1272 nt3.9□□□□□ -1.79
RUP1Q12242 YOR338WYOR338W 1092 nt3.9□□□□□ -1.79
RUP1Q12242 OM14YBR230C 405 nt3.9□□□□□ -1.79
RUP1Q12242 FYV5YCL058C 459 nt3.9□□□□□ -1.79
RUP1Q12242 HCA4YJL033W 2313 nt3.9□□□□□ -1.79
RUP1Q12242 POL31YJR006W 1464 nt3.9□□□□□ -1.79
RUP1Q12242 HCM1YCR065W 1695 nt3.9□□□□□ -1.79
RUP1Q12242 GCN5YGR252W 1320 nt3.9□□□□□ -1.79
RUP1Q12242 MCP2YLR253W 1710 nt3.9□□□□□ -1.79
RUP1Q12242 YOR022CYOR022C 2148 nt3.89□□□□□ -1.79
RUP1Q12242 YJR038CYJR038C 363 nt3.89□□□□□ -1.79
RUP1Q12242 EBP2YKL172W 1284 nt3.89□□□□□ -1.79
RUP1Q12242 YLL047WYLL047W 384 nt3.89□□□□□ -1.79
RUP1Q12242 YAL069WYAL069W 315 nt3.89□□□□□ -1.79
RUP1Q12242 IDI1YPL117C 867 nt3.89□□□□□ -1.79
RUP1Q12242 PRP31YGR091W 1485 nt3.89□□□□□ -1.79
RUP1Q12242 ALR2YFL050C 2577 nt3.89□□□□□ -1.79
RUP1Q12242 YER077CYER077C 2067 nt3.88□□□□□ -1.79
RUP1Q12242 SPO73YER046W 432 nt3.88□□□□□ -1.79
RUP1Q12242 COS12YGL263W 1143 nt3.88□□□□□ -1.79
RUP1Q12242 CLC1YGR167W 702 nt3.88□□□□□ -1.79
RUP1Q12242 YJR112W-AYJR112W-A 330 nt3.88□□□□□ -1.79
RUP1Q12242 DID4YKL002W 699 nt3.88□□□□□ -1.79
RUP1Q12242 NRK1YNL129W 723 nt3.88□□□□□ -1.79
RUP1Q12242 MET17YLR303W 1335 nt3.88□□□□□ -1.79
RUP1Q12242 YGL140CYGL140C 3660 nt3.88□□□□□ -1.79
RUP1Q12242 YDL228CYDL228C 642 nt3.87□□□□□ -1.79
RUP1Q12242 ENT5YDR153C 1236 nt3.87□□□□□ -1.79
RUP1Q12242 YGL258W-AYGL258W-A 234 nt3.87□□□□□ -1.79
RUP1Q12242 PXR1YGR280C 816 nt3.87□□□□□ -1.79
RUP1Q12242 RPB3YIL021W 957 nt3.87□□□□□ -1.79
RUP1Q12242 AAD10YJR155W 867 nt3.87□□□□□ -1.79
RUP1Q12242 SKG1YKR100C 1068 nt3.87□□□□□ -1.79
RUP1Q12242 IES3YLR052W 753 nt3.87□□□□□ -1.79
RUP1Q12242 YGK3YOL128C 1128 nt3.87□□□□□ -1.79
RUP1Q12242 IAH1YOR126C 717 nt3.87□□□□□ -1.79
RUP1Q12242 MUM2YBR057C 1101 nt3.87□□□□□ -1.79
RUP1Q12242 MSA1YOR066W 1890 nt3.87□□□□□ -1.79
RUP1Q12242 OSH2YDL019C 3852 nt3.87□□□□□ -1.79
RUP1Q12242 MCM7YBR202W 2538 nt3.86□□□□□ -1.79
RUP1Q12242 YDR526CYDR526C 471 nt3.86□□□□□ -1.79
RUP1Q12242 DDI2YFL061W 678 nt3.86□□□□□ -1.79
RUP1Q12242 YGL074CYGL074C 327 nt3.86□□□□□ -1.79
RUP1Q12242 TEX1YNL253W 1269 nt3.86□□□□□ -1.79
RUP1Q12242 IST1YNL265C 897 nt3.86□□□□□ -1.79
RUP1Q12242 MCK1YNL307C 1128 nt3.86□□□□□ -1.79
RUP1Q12242 DDI3YNL335W 678 nt3.86□□□□□ -1.79
RUP1Q12242 TAF14YPL129W 735 nt3.86□□□□□ -1.79
RUP1Q12242 BCK2YER167W 2556 nt3.86□□□□□ -1.79
RUP1Q12242 SPS2YDR522C 1509 nt3.85□□□□□ -1.79
RUP1Q12242 TCO89YPL180W 2400 nt3.85□□□□□ -1.79
RUP1Q12242 CLN2YPL256C 1638 nt3.85□□□□□ -1.79
RUP1Q12242 GAT2YMR136W 1683 nt3.85□□□□□ -1.79
RUP1Q12242 DPB4YDR121W 591 nt3.85□□□□□ -1.79
RUP1Q12242 YDR161WYDR161W 1164 nt3.85□□□□□ -1.79
RUP1Q12242 UBC8YEL012W 657 nt3.85□□□□□ -1.79
RUP1Q12242 TYS1YGR185C 1185 nt3.85□□□□□ -1.79
RUP1Q12242 PER33YLR064W 822 nt3.85□□□□□ -1.79
RUP1Q12242 MDJ2YNL328C 441 nt3.85□□□□□ -1.79
RUP1Q12242 TMC1YOR052C 453 nt3.85□□□□□ -1.79
RUP1Q12242 PTR3YFR029W 2037 nt3.85□□□□□ -1.79
RUP1Q12242 HPR1YDR138W 2259 nt3.84□□□□□ -1.79
RUP1Q12242 YCL075WYCL075W 441 nt3.84□□□□□ -1.79
RUP1Q12242 YCR015CYCR015C 954 nt3.84□□□□□ -1.79
RUP1Q12242 HSP30YCR021C 999 nt3.84□□□□□ -1.79
RUP1Q12242 MRPS35YGR165W 1038 nt3.84□□□□□ -1.79
RUP1Q12242 BET1YIL004C 429 nt3.84□□□□□ -1.79
RUP1Q12242 YAL065CYAL065C 387 nt3.84□□□□□ -1.79
RUP1Q12242 FOL3YMR113W 1284 nt3.84□□□□□ -1.79
RUP1Q12242 YNL144W-AYNL144W-A 84 nt3.84□□□□□ -1.79
RUP1Q12242 RPN6YDL097C 1305 nt3.84□□□□□ -1.79
RUP1Q12242 SEC2YNL272C 2280 nt3.84□□□□□ -1.79
RUP1Q12242 UBP6YFR010W 1500 nt3.84□□□□□ -1.8
RUP1Q12242 YPS7YDR349C 1791 nt3.84□□□□□ -1.8
RUP1Q12242 SHU2YDR078C 672 nt3.83□□□□□ -1.8
RUP1Q12242 SEC53YFL045C 765 nt3.83□□□□□ -1.8
RUP1Q12242 YLR412C-AYLR412C-A 207 nt3.83□□□□□ -1.8
RUP1Q12242 YML116W-AYML116W-A 303 nt3.83□□□□□ -1.8
RUP1Q12242 YBL036CYBL036C 774 nt3.83□□□□□ -1.8
RUP1Q12242 REX4YOL080C 870 nt3.83□□□□□ -1.8
RUP1Q12242 UAF30YOR295W 687 nt3.83□□□□□ -1.8
RUP1Q12242 AIM14YGL160W 1713 nt3.83□□□□□ -1.8
RUP1Q12242 STU1YBL034C 4542 nt3.83□□□□□ -1.8
RUP1Q12242 KRE29YER038C 1395 nt3.82□□□□□ -1.8
RUP1Q12242 HOM2YDR158W 1098 nt3.82□□□□□ -1.8
RUP1Q12242 YDR290WYDR290W 330 nt3.82□□□□□ -1.8
RUP1Q12242 SPT3YDR392W 1014 nt3.82□□□□□ -1.8
RUP1Q12242 MPC1YGL080W 393 nt3.82□□□□□ -1.8
RUP1Q12242 YGL132WYGL132W 336 nt3.82□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 16.7 ms