Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 UNC93B1-205ENST00000528423 833 ntTSL 314.86□□□□□ -0.034e-6■■■■□ 19.3
SRSF1Q07955 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.86□□□□□ -0.034e-6■■■■□ 19.3
SRSF1Q07955 UNC93B1-202ENST00000524455 836 ntTSL 514.86□□□□□ -0.034e-6■■■■□ 19.3
SRSF1Q07955 ZNF384-211ENST00000540915 1140 ntTSL 214.8□□□□□ -0.044e-6■■■■□ 19.3
SRSF1Q07955 TAF15-214ENST00000605649 776 ntTSL 514.7□□□□□ -0.064e-6■■■■□ 19.3
SRSF1Q07955 TAF15-208ENST00000604360 409 ntTSL 314.7□□□□□ -0.064e-6■■■■□ 19.3
SRSF1Q07955 USP15-206ENST00000546718 559 ntTSL 214.6□□□□□ -0.072e-10■■■■□ 19.3
SRSF1Q07955 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.14e-6■■■■□ 19.3
SRSF1Q07955 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.24□□□□□ -0.134e-6■■■■□ 19.3
SRSF1Q07955 CDK11A-209ENST00000460465 2333 ntTSL 1 (best)14.19□□□□□ -0.141e-7■■■■□ 19.3
SRSF1Q07955 ZNF136-203ENST00000425827 474 ntTSL 414.17□□□□□ -0.144e-6■■■■□ 19.3
SRSF1Q07955 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.17□□□□□ -0.141e-7■■■■□ 19.3
SRSF1Q07955 CDK11A-223ENST00000509982 2306 ntTSL 513.98□□□□□ -0.171e-7■■■■□ 19.3
SRSF1Q07955 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.251e-7■■■■□ 19.3
SRSF1Q07955 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.251e-7■■■■□ 19.3
SRSF1Q07955 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.5□□□□□ -0.251e-7■■■■□ 19.3
SRSF1Q07955 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.251e-7■■■■□ 19.3
SRSF1Q07955 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.46□□□□□ -0.251e-7■■■■□ 19.3
SRSF1Q07955 ZNF384-215ENST00000544482 557 ntTSL 413.38□□□□□ -0.274e-6■■■■□ 19.3
SRSF1Q07955 BARD1-202ENST00000421162 766 ntTSL 313.35□□□□□ -0.274e-6■■■■□ 19.3
SRSF1Q07955 MIR6125-201ENST00000618986 96 ntBASIC13.28□□□□□ -0.284e-11■■■■□ 19.3
SRSF1Q07955 OXA1L-205ENST00000442110 691 ntTSL 513.21□□□□□ -0.294e-6■■■■□ 19.3
SRSF1Q07955 OXA1L-208ENST00000483939 1224 ntTSL 213.09□□□□□ -0.314e-6■■■■□ 19.3
SRSF1Q07955 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.344e-6■■■■□ 19.3
SRSF1Q07955 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.93□□□□□ -0.344e-6■■■■□ 19.3
SRSF1Q07955 ZNF136-204ENST00000439995 478 ntTSL 212.92□□□□□ -0.344e-6■■■■□ 19.3
SRSF1Q07955 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.76□□□□□ -0.374e-6■■■■□ 19.3
SRSF1Q07955 USP15-215ENST00000549523 584 ntTSL 512.44□□□□□ -0.424e-7■■■■□ 19.3
SRSF1Q07955 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.424e-6■■■■□ 19.3
SRSF1Q07955 ZNF384-207ENST00000535485 912 ntTSL 312.36□□□□□ -0.434e-6■■■■□ 19.3
SRSF1Q07955 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.28□□□□□ -0.444e-6■■■■□ 19.3
SRSF1Q07955 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.27□□□□□ -0.441e-7■■■■□ 19.3
SRSF1Q07955 BARD1-204ENST00000455743 2261 ntTSL 512.23□□□□□ -0.454e-6■■■■□ 19.3
SRSF1Q07955 USP15-217ENST00000551206 1022 ntTSL 212.13□□□□□ -0.474e-7■■■■□ 19.3
SRSF1Q07955 DDX27-205ENST00000493252 825 ntTSL 311.97□□□□□ -0.494e-6■■■■□ 19.3
SRSF1Q07955 OXA1L-206ENST00000473744 824 ntTSL 311.87□□□□□ -0.514e-6■■■■□ 19.3
SRSF1Q07955 OXA1L-211ENST00000557299 538 ntTSL 211.87□□□□□ -0.514e-6■■■■□ 19.3
SRSF1Q07955 BARD1-207ENST00000471787 872 ntTSL 211.84□□□□□ -0.514e-6■■■■□ 19.3
SRSF1Q07955 BARD1-214ENST00000620057 1456 ntTSL 1 (best) BASIC11.7□□□□□ -0.544e-6■■■■□ 19.3
SRSF1Q07955 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.614e-6■■■■□ 19.3
SRSF1Q07955 FANCA-227ENST00000567883 650 ntTSL 211.14□□□□□ -0.635e-22■■■■□ 19.3
SRSF1Q07955 DDX27-204ENST00000484427 4929 ntTSL 1 (best)11.02□□□□□ -0.654e-6■■■■□ 19.3
SRSF1Q07955 OXA1L-209ENST00000495424 1679 ntTSL 210.93□□□□□ -0.664e-6■■■■□ 19.3
SRSF1Q07955 ORC6-204ENST00000566860 1699 ntTSL 2 BASIC10.89□□□□□ -0.674e-6■■■■□ 19.3
SRSF1Q07955 USP15-204ENST00000537297 579 ntTSL 210.78□□□□□ -0.684e-7■■■■□ 19.3
SRSF1Q07955 ZNF136-202ENST00000418338 565 ntTSL 410.72□□□□□ -0.694e-6■■■■□ 19.3
SRSF1Q07955 DDX27-206ENST00000618172 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.754e-6■■■■□ 19.3
SRSF1Q07955 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC10.28□□□□□ -0.764e-6■■■■□ 19.3
SRSF1Q07955 ZNF384-203ENST00000361959 2978 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.774e-6■■■■□ 19.3
SRSF1Q07955 DDX27-201ENST00000371764 2643 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.784e-6■■■■□ 19.3
SRSF1Q07955 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.794e-6■■■■□ 19.3
SRSF1Q07955 INAVA-201ENST00000367342 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.844e-6■■■■□ 19.3
SRSF1Q07955 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.844e-6■■■■□ 19.3
SRSF1Q07955 BARD1-212ENST00000617164 5449 ntTSL 1 (best) BASIC9.78□□□□□ -0.844e-6■■■■□ 19.3
SRSF1Q07955 FANCA-225ENST00000567621 618 ntTSL 39.13□□□□□ -0.952e-7■■■■□ 19.3
SRSF1Q07955 USP15-208ENST00000548524 648 ntTSL 28.87□□□□□ -0.994e-7■■■■□ 19.3
SRSF1Q07955 DDX27-207ENST00000622530 2693 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.994e-6■■■■□ 19.3
SRSF1Q07955 AC015849.4-201ENST00000603678 421 ntTSL 5 BASIC8.81□□□□□ -14e-6■■■■□ 19.3
SRSF1Q07955 ZNF384-212ENST00000542351 572 ntTSL 48.75□□□□□ -1.014e-6■■■■□ 19.3
SRSF1Q07955 ARHGEF11-206ENST00000487682 4796 ntTSL 28.6□□□□□ -1.034e-6■■■■□ 19.3
SRSF1Q07955 BARD1-211ENST00000613706 4153 ntTSL 1 (best) BASIC8.54□□□□□ -1.044e-6■■■■□ 19.3
SRSF1Q07955 BARD1-210ENST00000613374 4096 ntTSL 1 (best) BASIC8.36□□□□□ -1.074e-6■■■■□ 19.3
SRSF1Q07955 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.084e-6■■■■□ 19.3
SRSF1Q07955 USP15-202ENST00000312635 2226 ntTSL 1 (best) BASIC7.76□□□□□ -1.174e-7■■■■□ 19.3
SRSF1Q07955 BARD1-213ENST00000619009 3967 ntTSL 1 (best) BASIC7.51□□□□□ -1.214e-6■■■■□ 19.3
SRSF1Q07955 OXA1L-213ENST00000612549 2971 ntTSL 1 (best) BASIC7.51□□□□□ -1.214e-6■■■■□ 19.3
SRSF1Q07955 ZNF384-210ENST00000538829 506 ntTSL 47.23□□□□□ -1.254e-6■■■■□ 19.3
SRSF1Q07955 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.394e-6■■■■□ 19.3
SRSF1Q07955 USP15-212ENST00000549237 791 ntTSL 35.95□□□□□ -1.464e-7■■■■□ 19.3
SRSF1Q07955 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.694e-7■■■■□ 19.3
SRSF1Q07955 HELLS-208ENST00000462057 778 ntTSL 33.98□□□□□ -1.774e-6■■■■□ 19.3
SRSF1Q07955 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.844e-6■■■■□ 19.3
SRSF1Q07955 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.94e-6■■■■□ 19.3
SRSF1Q07955 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.964e-7■■■■□ 19.3
SRSF1Q07955 LRRC45-203ENST00000581227 1145 ntTSL 519.57■□□□□ 0.721e-6■■■■□ 19.3
SRSF1Q07955 RECQL4-202ENST00000524998 686 ntTSL 319.18■□□□□ 0.661e-6■■■■□ 19.3
SRSF1Q07955 SFPQ-209ENST00000485454 339 ntTSL 23.81□□□□□ -1.81e-6■■■■□ 19.3
SRSF1Q07955 RNF149-202ENST00000424632 2010 ntTSL 216.65■□□□□ 0.267e-8■■■■□ 19.3
SRSF1Q07955 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.257e-8■■■■□ 19.3
SRSF1Q07955 GTPBP2-206ENST00000452781 681 ntTSL 520.32■□□□□ 0.844e-12■■■■□ 19.3
SRSF1Q07955 EHBP1L1-205ENST00000529099 490 ntTSL 519.32■□□□□ 0.682e-6■■■■□ 19.3
SRSF1Q07955 HDAC10-217ENST00000496235 885 ntTSL 518.88■□□□□ 0.612e-6■■■■□ 19.3
SRSF1Q07955 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.512e-6■■■■□ 19.3
SRSF1Q07955 HDAC10-209ENST00000471375 928 ntTSL 517.94■□□□□ 0.462e-6■■■■□ 19.3
SRSF1Q07955 HDAC10-212ENST00000477814 1784 ntTSL 216.88■□□□□ 0.292e-6■■■■□ 19.3
SRSF1Q07955 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.164e-12■■■■□ 19.3
SRSF1Q07955 GTPBP2-209ENST00000480263 898 ntTSL 212.16□□□□□ -0.464e-12■■■■□ 19.3
SRSF1Q07955 GTPBP2-205ENST00000442748 946 ntTSL 311.94□□□□□ -0.54e-12■■■■□ 19.3
SRSF1Q07955 HDAC10-220ENST00000497952 976 ntTSL 510.49□□□□□ -0.732e-6■■■■□ 19.3
SRSF1Q07955 PELP1-215ENST00000575534 601 ntTSL 310.48□□□□□ -0.732e-6■■■■□ 19.3
SRSF1Q07955 GTPBP2-201ENST00000307114 2830 ntTSL 2 BASIC9.17□□□□□ -0.944e-12■■■■□ 19.3
SRSF1Q07955 GTPBP2-208ENST00000476510 2816 ntTSL 58.94□□□□□ -0.984e-12■■■■□ 19.3
SRSF1Q07955 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.132e-6■■■■□ 19.3
SRSF1Q07955 CA5A-202ENST00000566402 725 ntTSL 27.45□□□□□ -1.222e-6■■■■□ 19.3
SRSF1Q07955 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.842e-6■■■■□ 19.3
SRSF1Q07955 NFATC2IP-202ENST00000562977 638 ntTSL 426.32■■□□□ 1.81e-6■■■□□ 19.2
SRSF1Q07955 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.051e-6■■■□□ 19.2
SRSF1Q07955 NFATC2IP-203ENST00000564978 2350 ntTSL 1 (best) BASIC7.74□□□□□ -1.171e-6■■■□□ 19.2
SRSF1Q07955 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.46e-9■■■□□ 19.2
SRSF1Q07955 RECQL4-207ENST00000534538 725 ntTSL 317.41■□□□□ 0.388e-7■■■□□ 19.2
Retrieved 100 of 14,836 protein–RNA pairs in 37.6 ms