Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC30.07■■■□□ 2.4
COL16A1Q07092 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
COL16A1Q07092 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC30.07■■■□□ 2.4
COL16A1Q07092 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC30.07■■■□□ 2.4
COL16A1Q07092 AC068587.7-201ENST00000641602 218 ntBASIC30.07■■■□□ 2.4
COL16A1Q07092 MKRN4P-201ENST00000444706 1521 ntBASIC30.06■■■□□ 2.4
COL16A1Q07092 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
COL16A1Q07092 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
COL16A1Q07092 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC30.06■■■□□ 2.4
COL16A1Q07092 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
COL16A1Q07092 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
COL16A1Q07092 MYC-209ENST00000641252 345 ntBASIC30.06■■■□□ 2.4
COL16A1Q07092 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
COL16A1Q07092 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
COL16A1Q07092 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC30.05■■■□□ 2.4
COL16A1Q07092 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
COL16A1Q07092 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC30.05■■■□□ 2.4
COL16A1Q07092 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
COL16A1Q07092 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
COL16A1Q07092 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
COL16A1Q07092 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
COL16A1Q07092 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
COL16A1Q07092 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
COL16A1Q07092 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
COL16A1Q07092 EI24-211ENST00000534546 1544 ntTSL 2 BASIC30.04■■■□□ 2.4
COL16A1Q07092 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
COL16A1Q07092 ESRRAP1-201ENST00000400596 1257 ntBASIC30.04■■■□□ 2.4
COL16A1Q07092 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC30.04■■■□□ 2.4
COL16A1Q07092 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC30.04■■■□□ 2.4
COL16A1Q07092 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
COL16A1Q07092 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC30.04■■■□□ 2.4
COL16A1Q07092 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
COL16A1Q07092 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC30.04■■■□□ 2.4
COL16A1Q07092 LINC01529-204ENST00000636474 1715 ntBASIC30.04■■■□□ 2.4
COL16A1Q07092 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
COL16A1Q07092 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
COL16A1Q07092 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
COL16A1Q07092 GAS7-202ENST00000396115 929 ntTSL 5 BASIC30.04■■■□□ 2.4
COL16A1Q07092 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
COL16A1Q07092 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
COL16A1Q07092 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
COL16A1Q07092 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
COL16A1Q07092 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
COL16A1Q07092 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
COL16A1Q07092 AC006058.3-201ENST00000606217 1069 ntBASIC30.03■■■□□ 2.4
COL16A1Q07092 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
COL16A1Q07092 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC30.03■■■□□ 2.4
COL16A1Q07092 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
COL16A1Q07092 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
COL16A1Q07092 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
COL16A1Q07092 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
COL16A1Q07092 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC30.02■■■□□ 2.4
COL16A1Q07092 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC30.02■■■□□ 2.4
COL16A1Q07092 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
COL16A1Q07092 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC30.02■■■□□ 2.4
COL16A1Q07092 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
COL16A1Q07092 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
COL16A1Q07092 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
COL16A1Q07092 MIR1224-201ENST00000408193 85 ntBASIC30.01■■■□□ 2.39
COL16A1Q07092 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
COL16A1Q07092 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
COL16A1Q07092 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC30.01■■■□□ 2.39
COL16A1Q07092 AC010141.3-201ENST00000456659 717 ntBASIC30.01■■■□□ 2.39
COL16A1Q07092 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC30.01■■■□□ 2.39
COL16A1Q07092 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
COL16A1Q07092 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
COL16A1Q07092 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
COL16A1Q07092 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
COL16A1Q07092 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
COL16A1Q07092 MMD2-204ENST00000612910 778 ntTSL 5 BASIC30■■■□□ 2.39
COL16A1Q07092 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC30■■■□□ 2.39
COL16A1Q07092 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC30■■■□□ 2.39
COL16A1Q07092 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
COL16A1Q07092 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
COL16A1Q07092 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
COL16A1Q07092 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
COL16A1Q07092 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC30■■■□□ 2.39
COL16A1Q07092 AC013268.1-206ENST00000638368 961 ntBASIC30■■■□□ 2.39
COL16A1Q07092 AC112229.1-201ENST00000639295 961 ntBASIC30■■■□□ 2.39
COL16A1Q07092 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC29.99■■■□□ 2.39
COL16A1Q07092 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
COL16A1Q07092 MAX-217ENST00000557277 728 ntTSL 3 BASIC29.99■■■□□ 2.39
COL16A1Q07092 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
COL16A1Q07092 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
COL16A1Q07092 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
COL16A1Q07092 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC29.98■■■□□ 2.39
COL16A1Q07092 AC010331.1-201ENST00000611423 582 ntBASIC29.98■■■□□ 2.39
COL16A1Q07092 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
COL16A1Q07092 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
COL16A1Q07092 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC29.98■■■□□ 2.39
COL16A1Q07092 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC29.97■■■□□ 2.39
COL16A1Q07092 AC128676.1-201ENST00000454392 318 ntBASIC29.97■■■□□ 2.39
COL16A1Q07092 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC29.97■■■□□ 2.39
COL16A1Q07092 AP001160.3-201ENST00000601484 763 ntBASIC29.97■■■□□ 2.39
COL16A1Q07092 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
COL16A1Q07092 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC29.96■■■□□ 2.39
COL16A1Q07092 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
COL16A1Q07092 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
COL16A1Q07092 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC29.96■■■□□ 2.39
COL16A1Q07092 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC29.96■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms