Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRA2BP62995 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRA2BP62995 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.65■□□□□ 0.9
TRA2BP62995 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.64■□□□□ 0.9
TRA2BP62995 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRA2BP62995 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRA2BP62995 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.64■□□□□ 0.9
TRA2BP62995 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRA2BP62995 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRA2BP62995 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TRA2BP62995 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.64■□□□□ 0.89
TRA2BP62995 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRA2BP62995 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRA2BP62995 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRA2BP62995 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRA2BP62995 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRA2BP62995 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRA2BP62995 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRA2BP62995 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRA2BP62995 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRA2BP62995 AC079089.2-201ENST00000531211 1277 ntBASIC20.63■□□□□ 0.89
TRA2BP62995 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TRA2BP62995 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRA2BP62995 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRA2BP62995 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
TRA2BP62995 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRA2BP62995 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRA2BP62995 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRA2BP62995 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRA2BP62995 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRA2BP62995 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRA2BP62995 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRA2BP62995 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRA2BP62995 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRA2BP62995 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRA2BP62995 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.62■□□□□ 0.89
TRA2BP62995 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRA2BP62995 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRA2BP62995 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRA2BP62995 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
TRA2BP62995 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.62■□□□□ 0.89
TRA2BP62995 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRA2BP62995 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRA2BP62995 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRA2BP62995 AC008406.3-201ENST00000620001 1374 ntBASIC20.61■□□□□ 0.89
TRA2BP62995 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRA2BP62995 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.61■□□□□ 0.89
TRA2BP62995 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRA2BP62995 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRA2BP62995 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRA2BP62995 AC010141.3-201ENST00000456659 717 ntBASIC20.61■□□□□ 0.89
TRA2BP62995 AP005435.1-201ENST00000529293 1178 ntBASIC20.61■□□□□ 0.89
TRA2BP62995 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.61■□□□□ 0.89
TRA2BP62995 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.61■□□□□ 0.89
TRA2BP62995 AC010525.1-201ENST00000585559 441 ntBASIC20.61■□□□□ 0.89
TRA2BP62995 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
TRA2BP62995 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.61■□□□□ 0.89
TRA2BP62995 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TRA2BP62995 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.61■□□□□ 0.89
TRA2BP62995 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRA2BP62995 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRA2BP62995 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRA2BP62995 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
TRA2BP62995 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRA2BP62995 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRA2BP62995 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TRA2BP62995 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRA2BP62995 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRA2BP62995 UNC93B3-201ENST00000308076 687 ntBASIC20.6■□□□□ 0.89
TRA2BP62995 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRA2BP62995 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.6■□□□□ 0.89
TRA2BP62995 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRA2BP62995 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRA2BP62995 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.6■□□□□ 0.89
TRA2BP62995 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.6■□□□□ 0.89
TRA2BP62995 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRA2BP62995 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRA2BP62995 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRA2BP62995 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRA2BP62995 C11orf96-202ENST00000528572 1834 ntBASIC20.6■□□□□ 0.89
TRA2BP62995 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRA2BP62995 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRA2BP62995 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRA2BP62995 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.59■□□□□ 0.89
TRA2BP62995 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRA2BP62995 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.59■□□□□ 0.89
TRA2BP62995 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRA2BP62995 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRA2BP62995 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRA2BP62995 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRA2BP62995 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.59■□□□□ 0.89
TRA2BP62995 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRA2BP62995 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TRA2BP62995 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRA2BP62995 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.59■□□□□ 0.89
TRA2BP62995 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRA2BP62995 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRA2BP62995 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRA2BP62995 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TRA2BP62995 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms