Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.91■□□□□ 0.78
CDC42P60953 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDC42P60953 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDC42P60953 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDC42P60953 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CDC42P60953 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDC42P60953 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.91■□□□□ 0.78
CDC42P60953 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDC42P60953 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.9■□□□□ 0.78
CDC42P60953 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC42P60953 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.9■□□□□ 0.78
CDC42P60953 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC42P60953 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.9■□□□□ 0.78
CDC42P60953 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
CDC42P60953 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDC42P60953 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC42P60953 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC42P60953 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDC42P60953 AC244015.2-201ENST00000616358 1861 ntBASIC19.9■□□□□ 0.78
CDC42P60953 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC42P60953 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDC42P60953 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CDC42P60953 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.89■□□□□ 0.77
CDC42P60953 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDC42P60953 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDC42P60953 RARRES2P2-201ENST00000394842 485 ntBASIC19.89■□□□□ 0.77
CDC42P60953 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.89■□□□□ 0.77
CDC42P60953 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDC42P60953 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.89■□□□□ 0.77
CDC42P60953 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDC42P60953 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CDC42P60953 HSD17B1P1-201ENST00000590052 955 ntBASIC19.89■□□□□ 0.77
CDC42P60953 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDC42P60953 AC005229.4-201ENST00000610085 2198 ntBASIC19.89■□□□□ 0.77
CDC42P60953 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CDC42P60953 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.88■□□□□ 0.77
CDC42P60953 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDC42P60953 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
CDC42P60953 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC42P60953 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC42P60953 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC42P60953 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC42P60953 FP325331.1-202ENST00000623531 1380 ntBASIC19.88■□□□□ 0.77
CDC42P60953 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC42P60953 KRT18P60-201ENST00000312876 1297 ntBASIC19.88■□□□□ 0.77
CDC42P60953 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC42P60953 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC42P60953 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CDC42P60953 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC42P60953 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.88■□□□□ 0.77
CDC42P60953 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.88■□□□□ 0.77
CDC42P60953 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC42P60953 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDC42P60953 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42P60953 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CDC42P60953 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CDC42P60953 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42P60953 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.87■□□□□ 0.77
CDC42P60953 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42P60953 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42P60953 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42P60953 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.87■□□□□ 0.77
CDC42P60953 AC009086.3-201ENST00000623486 1008 ntBASIC19.87■□□□□ 0.77
CDC42P60953 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42P60953 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.87■□□□□ 0.77
CDC42P60953 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.87■□□□□ 0.77
CDC42P60953 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CDC42P60953 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42P60953 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42P60953 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC42P60953 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDC42P60953 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDC42P60953 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDC42P60953 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDC42P60953 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDC42P60953 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.86■□□□□ 0.77
CDC42P60953 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CDC42P60953 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.86■□□□□ 0.77
CDC42P60953 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
CDC42P60953 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDC42P60953 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CDC42P60953 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
CDC42P60953 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CDC42P60953 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDC42P60953 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDC42P60953 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.85■□□□□ 0.77
CDC42P60953 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
CDC42P60953 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDC42P60953 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDC42P60953 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDC42P60953 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDC42P60953 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.85■□□□□ 0.77
CDC42P60953 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDC42P60953 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CDC42P60953 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.85■□□□□ 0.77
CDC42P60953 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDC42P60953 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDC42P60953 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDC42P60953 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.85■□□□□ 0.77
CDC42P60953 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms