Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CLDN2P57739 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN2P57739 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.65■■□□□ 1.06
CLDN2P57739 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.64■■□□□ 1.06
CLDN2P57739 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.64■■□□□ 1.06
CLDN2P57739 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CLDN2P57739 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.64■■□□□ 1.05
CLDN2P57739 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.64■■□□□ 1.05
CLDN2P57739 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.64■■□□□ 1.05
CLDN2P57739 AC090192.1-201ENST00000517740 490 ntBASIC21.64■■□□□ 1.05
CLDN2P57739 KRT18P61-201ENST00000585825 1298 ntBASIC21.64■■□□□ 1.05
CLDN2P57739 OXCT2P1-201ENST00000447263 1535 ntBASIC21.64■■□□□ 1.05
CLDN2P57739 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN2P57739 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN2P57739 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.63■■□□□ 1.05
CLDN2P57739 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN2P57739 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN2P57739 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
CLDN2P57739 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CLDN2P57739 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN2P57739 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.62■■□□□ 1.05
CLDN2P57739 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN2P57739 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN2P57739 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN2P57739 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.62■■□□□ 1.05
CLDN2P57739 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN2P57739 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.62■■□□□ 1.05
CLDN2P57739 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.62■■□□□ 1.05
CLDN2P57739 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN2P57739 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN2P57739 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN2P57739 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN2P57739 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN2P57739 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN2P57739 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN2P57739 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.61■■□□□ 1.05
CLDN2P57739 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN2P57739 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN2P57739 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN2P57739 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.61■■□□□ 1.05
CLDN2P57739 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.61■■□□□ 1.05
CLDN2P57739 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.61■■□□□ 1.05
CLDN2P57739 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
CLDN2P57739 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN2P57739 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.61■■□□□ 1.05
CLDN2P57739 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.6■■□□□ 1.05
CLDN2P57739 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CLDN2P57739 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
CLDN2P57739 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.6■■□□□ 1.05
CLDN2P57739 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN2P57739 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN2P57739 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.6■■□□□ 1.05
CLDN2P57739 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
CLDN2P57739 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.6■■□□□ 1.05
CLDN2P57739 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.6■■□□□ 1.05
CLDN2P57739 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.6■■□□□ 1.05
CLDN2P57739 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN2P57739 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN2P57739 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.6■■□□□ 1.05
CLDN2P57739 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.59■■□□□ 1.05
CLDN2P57739 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN2P57739 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN2P57739 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CLDN2P57739 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN2P57739 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN2P57739 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN2P57739 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.59■■□□□ 1.05
CLDN2P57739 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CLDN2P57739 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.59■■□□□ 1.05
CLDN2P57739 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.59■■□□□ 1.05
CLDN2P57739 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.59■■□□□ 1.05
CLDN2P57739 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.59■■□□□ 1.05
CLDN2P57739 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.59■■□□□ 1.05
CLDN2P57739 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
CLDN2P57739 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.59■■□□□ 1.05
CLDN2P57739 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.59■■□□□ 1.05
CLDN2P57739 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.59■■□□□ 1.05
CLDN2P57739 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN2P57739 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN2P57739 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.59■■□□□ 1.05
CLDN2P57739 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLDN2P57739 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CLDN2P57739 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLDN2P57739 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.58■■□□□ 1.05
CLDN2P57739 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLDN2P57739 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.58■■□□□ 1.05
CLDN2P57739 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLDN2P57739 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLDN2P57739 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.58■■□□□ 1.05
CLDN2P57739 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLDN2P57739 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.58■■□□□ 1.05
CLDN2P57739 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLDN2P57739 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.58■■□□□ 1.05
CLDN2P57739 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.58■■□□□ 1.04
CLDN2P57739 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLDN2P57739 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.58■■□□□ 1.04
CLDN2P57739 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CLDN2P57739 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.57■■□□□ 1.04
CLDN2P57739 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN2P57739 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms