Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CLDN8P56748 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.78■□□□□ 0.92
CLDN8P56748 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN8P56748 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.78■□□□□ 0.92
CLDN8P56748 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN8P56748 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN8P56748 AC010542.4-201ENST00000563151 1910 ntBASIC20.78■□□□□ 0.92
CLDN8P56748 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN8P56748 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN8P56748 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN8P56748 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
CLDN8P56748 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.77■□□□□ 0.92
CLDN8P56748 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN8P56748 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.77■□□□□ 0.92
CLDN8P56748 AC241377.3-202ENST00000626088 1088 ntBASIC20.77■□□□□ 0.92
CLDN8P56748 AC241585.3-202ENST00000628937 1088 ntBASIC20.77■□□□□ 0.92
CLDN8P56748 AC245100.8-202ENST00000629247 1058 ntBASIC20.77■□□□□ 0.92
CLDN8P56748 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN8P56748 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN8P56748 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CLDN8P56748 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN8P56748 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.77■□□□□ 0.91
CLDN8P56748 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CLDN8P56748 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN8P56748 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN8P56748 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN8P56748 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN8P56748 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN8P56748 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN8P56748 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN8P56748 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN8P56748 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN8P56748 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN8P56748 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN8P56748 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN8P56748 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.76■□□□□ 0.91
CLDN8P56748 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN8P56748 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN8P56748 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN8P56748 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CLDN8P56748 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN8P56748 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN8P56748 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN8P56748 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.75■□□□□ 0.91
CLDN8P56748 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.75■□□□□ 0.91
CLDN8P56748 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN8P56748 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN8P56748 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.75■□□□□ 0.91
CLDN8P56748 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN8P56748 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.75■□□□□ 0.91
CLDN8P56748 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN8P56748 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN8P56748 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.74■□□□□ 0.91
CLDN8P56748 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN8P56748 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN8P56748 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN8P56748 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.74■□□□□ 0.91
CLDN8P56748 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CLDN8P56748 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN8P56748 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CLDN8P56748 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN8P56748 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.74■□□□□ 0.91
CLDN8P56748 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CLDN8P56748 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN8P56748 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.73■□□□□ 0.91
CLDN8P56748 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN8P56748 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN8P56748 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CLDN8P56748 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CLDN8P56748 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CLDN8P56748 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.73■□□□□ 0.91
CLDN8P56748 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CLDN8P56748 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CLDN8P56748 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.73■□□□□ 0.91
CLDN8P56748 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.73■□□□□ 0.91
CLDN8P56748 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
CLDN8P56748 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN8P56748 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CLDN8P56748 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN8P56748 FAM99A-202ENST00000538190 1989 ntBASIC20.72■□□□□ 0.91
CLDN8P56748 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN8P56748 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN8P56748 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN8P56748 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CLDN8P56748 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.72■□□□□ 0.91
CLDN8P56748 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.71■□□□□ 0.91
CLDN8P56748 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CLDN8P56748 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CLDN8P56748 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.71■□□□□ 0.91
CLDN8P56748 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.71■□□□□ 0.91
CLDN8P56748 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN8P56748 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CLDN8P56748 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN8P56748 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.71■□□□□ 0.91
CLDN8P56748 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN8P56748 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
CLDN8P56748 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN8P56748 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
CLDN8P56748 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN8P56748 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms