Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
KCNQ4P56696 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC28.22■■■□□ 2.11
KCNQ4P56696 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC28.21■■■□□ 2.11
KCNQ4P56696 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
KCNQ4P56696 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC28.21■■■□□ 2.11
KCNQ4P56696 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC28.21■■■□□ 2.11
KCNQ4P56696 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC28.21■■■□□ 2.11
KCNQ4P56696 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
KCNQ4P56696 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
KCNQ4P56696 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
KCNQ4P56696 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
KCNQ4P56696 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
KCNQ4P56696 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC28.21■■■□□ 2.11
KCNQ4P56696 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC28.2■■■□□ 2.1
KCNQ4P56696 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
KCNQ4P56696 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC28.2■■■□□ 2.1
KCNQ4P56696 SLC29A4P1-201ENST00000398760 971 ntBASIC28.2■■■□□ 2.1
KCNQ4P56696 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
KCNQ4P56696 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC28.2■■■□□ 2.1
KCNQ4P56696 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
KCNQ4P56696 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
KCNQ4P56696 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
KCNQ4P56696 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC28.19■■■□□ 2.1
KCNQ4P56696 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
KCNQ4P56696 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
KCNQ4P56696 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
KCNQ4P56696 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC28.19■■■□□ 2.1
KCNQ4P56696 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
KCNQ4P56696 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
KCNQ4P56696 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
KCNQ4P56696 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
KCNQ4P56696 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
KCNQ4P56696 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
KCNQ4P56696 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC28.18■■■□□ 2.1
KCNQ4P56696 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC28.18■■■□□ 2.1
KCNQ4P56696 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
KCNQ4P56696 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC28.18■■■□□ 2.1
KCNQ4P56696 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
KCNQ4P56696 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
KCNQ4P56696 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
KCNQ4P56696 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC28.17■■■□□ 2.1
KCNQ4P56696 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
KCNQ4P56696 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
KCNQ4P56696 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
KCNQ4P56696 RGMA-211ENST00000557420 989 ntTSL 3 BASIC28.17■■■□□ 2.1
KCNQ4P56696 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
KCNQ4P56696 AC079630.1-202ENST00000618127 1840 ntBASIC28.17■■■□□ 2.1
KCNQ4P56696 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
KCNQ4P56696 PXK-203ENST00000383715 1756 ntTSL 5 BASIC28.16■■■□□ 2.1
KCNQ4P56696 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
KCNQ4P56696 AP003733.4-201ENST00000623785 1697 ntBASIC28.16■■■□□ 2.1
KCNQ4P56696 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
KCNQ4P56696 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
KCNQ4P56696 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
KCNQ4P56696 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
KCNQ4P56696 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
KCNQ4P56696 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
KCNQ4P56696 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC28.15■■■□□ 2.1
KCNQ4P56696 BRI3-207ENST00000539286 699 ntTSL 2 BASIC28.15■■■□□ 2.1
KCNQ4P56696 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
KCNQ4P56696 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
KCNQ4P56696 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
KCNQ4P56696 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
KCNQ4P56696 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
KCNQ4P56696 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
KCNQ4P56696 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
KCNQ4P56696 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
KCNQ4P56696 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
KCNQ4P56696 CNN2P6-201ENST00000439038 900 ntBASIC28.14■■■□□ 2.1
KCNQ4P56696 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC28.14■■■□□ 2.1
KCNQ4P56696 ARL16-209ENST00000573715 763 ntTSL 3 BASIC28.14■■■□□ 2.1
KCNQ4P56696 ARL16-211ENST00000576135 694 ntTSL 3 BASIC28.14■■■□□ 2.1
KCNQ4P56696 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC28.14■■■□□ 2.1
KCNQ4P56696 AC068587.7-201ENST00000641602 218 ntBASIC28.14■■■□□ 2.1
KCNQ4P56696 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
KCNQ4P56696 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
KCNQ4P56696 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC28.13■■■□□ 2.09
KCNQ4P56696 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC28.13■■■□□ 2.09
KCNQ4P56696 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
KCNQ4P56696 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC28.13■■■□□ 2.09
KCNQ4P56696 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC28.13■■■□□ 2.09
KCNQ4P56696 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
KCNQ4P56696 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
KCNQ4P56696 OXCT2P1-201ENST00000447263 1535 ntBASIC28.13■■■□□ 2.09
KCNQ4P56696 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
KCNQ4P56696 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
KCNQ4P56696 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
KCNQ4P56696 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
KCNQ4P56696 AC105036.2-201ENST00000569468 176 ntBASIC28.12■■■□□ 2.09
KCNQ4P56696 KRT87P-202ENST00000534226 1464 ntBASIC28.12■■■□□ 2.09
KCNQ4P56696 AC005224.4-201ENST00000583262 1652 ntBASIC28.12■■■□□ 2.09
KCNQ4P56696 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
KCNQ4P56696 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
KCNQ4P56696 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC28.11■■■□□ 2.09
KCNQ4P56696 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC28.11■■■□□ 2.09
KCNQ4P56696 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC28.11■■■□□ 2.09
KCNQ4P56696 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
KCNQ4P56696 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC28.11■■■□□ 2.09
KCNQ4P56696 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
KCNQ4P56696 AC133041.1-202ENST00000642053 222 ntBASIC28.11■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms