Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC010141.3-201ENST00000456659 717 ntBASIC19.2■□□□□ 0.66
FOXG1P55316 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXG1P55316 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.2■□□□□ 0.66
FOXG1P55316 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXG1P55316 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.2■□□□□ 0.66
FOXG1P55316 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXG1P55316 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXG1P55316 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXG1P55316 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXG1P55316 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXG1P55316 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
FOXG1P55316 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.19■□□□□ 0.66
FOXG1P55316 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXG1P55316 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
FOXG1P55316 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXG1P55316 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.19■□□□□ 0.66
FOXG1P55316 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
FOXG1P55316 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
FOXG1P55316 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXG1P55316 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.18■□□□□ 0.66
FOXG1P55316 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXG1P55316 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
FOXG1P55316 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXG1P55316 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXG1P55316 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.18■□□□□ 0.66
FOXG1P55316 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.18■□□□□ 0.66
FOXG1P55316 MIR6084-201ENST00000622012 110 ntBASIC19.18■□□□□ 0.66
FOXG1P55316 AC068587.7-201ENST00000641602 218 ntBASIC19.18■□□□□ 0.66
FOXG1P55316 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXG1P55316 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.18■□□□□ 0.66
FOXG1P55316 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
FOXG1P55316 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXG1P55316 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FOXG1P55316 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXG1P55316 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.17■□□□□ 0.66
FOXG1P55316 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.17■□□□□ 0.66
FOXG1P55316 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXG1P55316 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.17■□□□□ 0.66
FOXG1P55316 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FOXG1P55316 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXG1P55316 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXG1P55316 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FOXG1P55316 AC068473.5-201ENST00000616428 2072 ntBASIC19.16■□□□□ 0.66
FOXG1P55316 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXG1P55316 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXG1P55316 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXG1P55316 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FOXG1P55316 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.16■□□□□ 0.66
FOXG1P55316 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.16■□□□□ 0.66
FOXG1P55316 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXG1P55316 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.16■□□□□ 0.66
FOXG1P55316 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.16■□□□□ 0.66
FOXG1P55316 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
FOXG1P55316 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXG1P55316 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
FOXG1P55316 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
FOXG1P55316 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXG1P55316 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
FOXG1P55316 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXG1P55316 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXG1P55316 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXG1P55316 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXG1P55316 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.15■□□□□ 0.66
FOXG1P55316 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.15■□□□□ 0.66
FOXG1P55316 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXG1P55316 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
FOXG1P55316 OXCT2P1-201ENST00000447263 1535 ntBASIC19.15■□□□□ 0.66
FOXG1P55316 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXG1P55316 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXG1P55316 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
FOXG1P55316 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
FOXG1P55316 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXG1P55316 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXG1P55316 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXG1P55316 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXG1P55316 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXG1P55316 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXG1P55316 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXG1P55316 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.14■□□□□ 0.65
FOXG1P55316 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXG1P55316 AC087239.1-201ENST00000622671 572 ntBASIC19.14■□□□□ 0.65
FOXG1P55316 AC105233.4-201ENST00000642045 216 ntBASIC19.14■□□□□ 0.65
FOXG1P55316 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXG1P55316 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXG1P55316 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXG1P55316 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXG1P55316 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXG1P55316 AC026271.2-201ENST00000428091 497 ntBASIC19.13■□□□□ 0.65
FOXG1P55316 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.13■□□□□ 0.65
FOXG1P55316 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.13■□□□□ 0.65
FOXG1P55316 AC012414.1-201ENST00000556676 535 ntBASIC19.13■□□□□ 0.65
FOXG1P55316 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.13■□□□□ 0.65
FOXG1P55316 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXG1P55316 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
FOXG1P55316 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
FOXG1P55316 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.13■□□□□ 0.65
FOXG1P55316 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
FOXG1P55316 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXG1P55316 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXG1P55316 AC133561.1-201ENST00000568600 2415 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms