Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CDH11P55287 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH11P55287 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CDH11P55287 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH11P55287 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH11P55287 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH11P55287 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.92■□□□□ 0.78
CDH11P55287 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH11P55287 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH11P55287 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.92■□□□□ 0.78
CDH11P55287 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.92■□□□□ 0.78
CDH11P55287 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CDH11P55287 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH11P55287 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH11P55287 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH11P55287 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH11P55287 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH11P55287 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH11P55287 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CDH11P55287 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH11P55287 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH11P55287 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.91■□□□□ 0.78
CDH11P55287 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CDH11P55287 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH11P55287 FBXW4P1-201ENST00000426721 2239 ntBASIC19.91■□□□□ 0.78
CDH11P55287 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH11P55287 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH11P55287 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH11P55287 AC087742.1-201ENST00000575880 1738 ntBASIC19.9■□□□□ 0.78
CDH11P55287 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDH11P55287 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH11P55287 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CDH11P55287 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDH11P55287 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH11P55287 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH11P55287 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH11P55287 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH11P55287 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH11P55287 AL512631.2-201ENST00000604634 923 ntBASIC19.9■□□□□ 0.78
CDH11P55287 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.9■□□□□ 0.78
CDH11P55287 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDH11P55287 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH11P55287 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CDH11P55287 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH11P55287 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH11P55287 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDH11P55287 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH11P55287 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDH11P55287 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH11P55287 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CDH11P55287 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH11P55287 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH11P55287 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH11P55287 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.89■□□□□ 0.77
CDH11P55287 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CDH11P55287 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CDH11P55287 MIR4466-201ENST00000606121 54 ntBASIC19.89■□□□□ 0.77
CDH11P55287 AC144652.1-201ENST00000609974 1624 ntBASIC19.89■□□□□ 0.77
CDH11P55287 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.89■□□□□ 0.77
CDH11P55287 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CDH11P55287 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH11P55287 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH11P55287 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH11P55287 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH11P55287 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH11P55287 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CDH11P55287 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH11P55287 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH11P55287 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH11P55287 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH11P55287 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH11P55287 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH11P55287 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH11P55287 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH11P55287 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH11P55287 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH11P55287 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.87■□□□□ 0.77
CDH11P55287 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH11P55287 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.87■□□□□ 0.77
CDH11P55287 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH11P55287 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.87■□□□□ 0.77
CDH11P55287 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.87■□□□□ 0.77
CDH11P55287 AL139246.5-201ENST00000606645 996 ntBASIC19.87■□□□□ 0.77
CDH11P55287 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH11P55287 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH11P55287 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.87■□□□□ 0.77
CDH11P55287 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
CDH11P55287 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH11P55287 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CDH11P55287 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.86■□□□□ 0.77
CDH11P55287 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH11P55287 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CDH11P55287 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CDH11P55287 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH11P55287 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH11P55287 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH11P55287 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.86■□□□□ 0.77
CDH11P55287 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH11P55287 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH11P55287 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms