Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EPHA4P54764 DUSP8P3-201ENST00000399571 1760 ntBASIC21.1■□□□□ 0.97
EPHA4P54764 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.1■□□□□ 0.97
EPHA4P54764 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EPHA4P54764 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EPHA4P54764 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.09■□□□□ 0.97
EPHA4P54764 AC022517.1-201ENST00000592429 346 ntBASIC21.09■□□□□ 0.97
EPHA4P54764 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EPHA4P54764 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EPHA4P54764 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EPHA4P54764 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
EPHA4P54764 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EPHA4P54764 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.09■□□□□ 0.97
EPHA4P54764 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
EPHA4P54764 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
EPHA4P54764 AC012676.1-201ENST00000574705 1949 ntBASIC21.08■□□□□ 0.97
EPHA4P54764 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
EPHA4P54764 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
EPHA4P54764 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
EPHA4P54764 NTF6G-201ENST00000591094 616 ntBASIC21.08■□□□□ 0.97
EPHA4P54764 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.08■□□□□ 0.97
EPHA4P54764 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
EPHA4P54764 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
EPHA4P54764 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
EPHA4P54764 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
EPHA4P54764 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
EPHA4P54764 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.07■□□□□ 0.96
EPHA4P54764 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EPHA4P54764 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
EPHA4P54764 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
EPHA4P54764 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.07■□□□□ 0.96
EPHA4P54764 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
EPHA4P54764 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
EPHA4P54764 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.07■□□□□ 0.96
EPHA4P54764 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
EPHA4P54764 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EPHA4P54764 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.07■□□□□ 0.96
EPHA4P54764 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
EPHA4P54764 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
EPHA4P54764 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
EPHA4P54764 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
EPHA4P54764 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EPHA4P54764 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
EPHA4P54764 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.06■□□□□ 0.96
EPHA4P54764 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
EPHA4P54764 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
EPHA4P54764 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.06■□□□□ 0.96
EPHA4P54764 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.06■□□□□ 0.96
EPHA4P54764 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EPHA4P54764 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.05■□□□□ 0.96
EPHA4P54764 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHA4P54764 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EPHA4P54764 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.05■□□□□ 0.96
EPHA4P54764 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EPHA4P54764 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.05■□□□□ 0.96
EPHA4P54764 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
EPHA4P54764 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHA4P54764 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.05■□□□□ 0.96
EPHA4P54764 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHA4P54764 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHA4P54764 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.05■□□□□ 0.96
EPHA4P54764 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EPHA4P54764 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
EPHA4P54764 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EPHA4P54764 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.04■□□□□ 0.96
EPHA4P54764 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.04■□□□□ 0.96
EPHA4P54764 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EPHA4P54764 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
EPHA4P54764 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EPHA4P54764 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EPHA4P54764 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EPHA4P54764 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EPHA4P54764 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.03■□□□□ 0.96
EPHA4P54764 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EPHA4P54764 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.03■□□□□ 0.96
EPHA4P54764 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
EPHA4P54764 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
EPHA4P54764 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
EPHA4P54764 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.03■□□□□ 0.96
EPHA4P54764 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EPHA4P54764 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.03■□□□□ 0.96
EPHA4P54764 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
EPHA4P54764 AL137784.2-201ENST00000607332 1000 ntBASIC21.03■□□□□ 0.96
EPHA4P54764 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
EPHA4P54764 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.03■□□□□ 0.96
EPHA4P54764 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EPHA4P54764 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.03■□□□□ 0.96
EPHA4P54764 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
EPHA4P54764 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EPHA4P54764 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EPHA4P54764 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EPHA4P54764 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.02■□□□□ 0.96
EPHA4P54764 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.02■□□□□ 0.96
EPHA4P54764 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EPHA4P54764 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.02■□□□□ 0.96
EPHA4P54764 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.02■□□□□ 0.96
EPHA4P54764 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.02■□□□□ 0.95
EPHA4P54764 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EPHA4P54764 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
EPHA4P54764 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms