Protein–RNA interactions for Protein: P53617

NRD1, Protein NRD1, yeastyeast

Known RBP RIP-Chip data

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NRD1P53617 YHR138CYHR138C 345 nt5.49□□□□□ -1.53
NRD1P53617 YIL102C-AYIL102C-A 228 nt5.49□□□□□ -1.53
NRD1P53617 MRPL44YMR225C 297 nt5.49□□□□□ -1.53 RIP-Chip
NRD1P53617 SCO1YBR037C 888 nt5.49□□□□□ -1.53 RIP-Chip
NRD1P53617 BSD2YBR290W 966 nt5.49□□□□□ -1.53
NRD1P53617 ASM4YDL088C 1587 nt5.49□□□□□ -1.53
NRD1P53617 PGS1YCL004W 1566 nt5.49□□□□□ -1.53
NRD1P53617 GEP3YOR205C 1671 nt5.49□□□□□ -1.53
NRD1P53617 MCM6YGL201C 3054 nt5.49□□□□□ -1.53
NRD1P53617 PUT1YLR142W 1431 nt5.48□□□□□ -1.53
NRD1P53617 MIG1YGL035C 1515 nt5.48□□□□□ -1.53
NRD1P53617 UGA3YDL170W 1587 nt5.48□□□□□ -1.53
NRD1P53617 YER087C-AYER087C-A 552 nt5.48□□□□□ -1.53
NRD1P53617 SNO3YFL060C 669 nt5.48□□□□□ -1.53
NRD1P53617 CGR1YGL029W 363 nt5.48□□□□□ -1.53
NRD1P53617 SIP2YGL208W 1248 nt5.48□□□□□ -1.53
NRD1P53617 MRPS35YGR165W 1038 nt5.48□□□□□ -1.53 RIP-Chip
NRD1P53617 ATG27YJL178C 816 nt5.48□□□□□ -1.53 RIP-Chip
NRD1P53617 ABM1YJR108W 372 nt5.48□□□□□ -1.53
NRD1P53617 BLI1YKL061W 342 nt5.48□□□□□ -1.53
NRD1P53617 RRT16YNL105W 429 nt5.48□□□□□ -1.53
NRD1P53617 SNO2YNL334C 669 nt5.48□□□□□ -1.53
NRD1P53617 YNR071CYNR071C 1029 nt5.48□□□□□ -1.53
NRD1P53617 MIX23YBL107C 591 nt5.48□□□□□ -1.53 RIP-Chip
NRD1P53617 YCL021W-AYCL021W-A 378 nt5.48□□□□□ -1.53
NRD1P53617 ALD6YPL061W 1503 nt5.48□□□□□ -1.53
NRD1P53617 YBR139WYBR139W 1527 nt5.48□□□□□ -1.53 RIP-Chip
NRD1P53617 RTT109YLL002W 1311 nt5.48□□□□□ -1.53
NRD1P53617 BSC5YNR069C 1470 nt5.47□□□□□ -1.53
NRD1P53617 TAX4YJL083W 1815 nt5.47□□□□□ -1.53 RIP-Chip
NRD1P53617 MRPL7YDR237W 879 nt5.47□□□□□ -1.53
NRD1P53617 RGI1YER067W 486 nt5.47□□□□□ -1.53
NRD1P53617 AHP1YLR109W 531 nt5.47□□□□□ -1.53 RIP-Chip
NRD1P53617 YBL044WYBL044W 369 nt5.47□□□□□ -1.53
NRD1P53617 YOR082CYOR082C 342 nt5.47□□□□□ -1.53
NRD1P53617 YMD8YML038C 1329 nt5.47□□□□□ -1.53
NRD1P53617 NSE5YML023C 1671 nt5.47□□□□□ -1.53
NRD1P53617 SFB3YHR098C 2790 nt5.46□□□□□ -1.53
NRD1P53617 MSS116YDR194C 1995 nt5.46□□□□□ -1.54
NRD1P53617 NUS1YDL193W 1128 nt5.46□□□□□ -1.54
NRD1P53617 SRB7YDR308C 423 nt5.46□□□□□ -1.54 RIP-Chip
NRD1P53617 CDC43YGL155W 1131 nt5.46□□□□□ -1.54
NRD1P53617 YGR151CYGR151C 336 nt5.46□□□□□ -1.54
NRD1P53617 YHR063W-AYHR063W-A 336 nt5.46□□□□□ -1.54
NRD1P53617 PCL7YIL050W 858 nt5.46□□□□□ -1.54 RIP-Chip
NRD1P53617 YGK3YOL128C 1128 nt5.46□□□□□ -1.54 RIP-Chip
NRD1P53617 CYC2YOR037W 1101 nt5.46□□□□□ -1.54
NRD1P53617 YPR098CYPR098C 486 nt5.46□□□□□ -1.54
NRD1P53617 RET1YOR207C 3450 nt5.46□□□□□ -1.54
NRD1P53617 MKK2YPL140C 1521 nt5.46□□□□□ -1.54
NRD1P53617 RPN4YDL020C 1596 nt5.46□□□□□ -1.54
NRD1P53617 YFL034WYFL034W 3222 nt5.46□□□□□ -1.54
NRD1P53617 GCD1YOR260W 1737 nt5.45□□□□□ -1.54
NRD1P53617 YFR052C-AYFR052C-A 306 nt5.45□□□□□ -1.54
NRD1P53617 MLC1YGL106W 450 nt5.45□□□□□ -1.54
NRD1P53617 BUD13YGL174W 801 nt5.45□□□□□ -1.54
NRD1P53617 TDH3YGR192C 999 nt5.45□□□□□ -1.54 RIP-Chip
NRD1P53617 RTA1YGR213C 954 nt5.45□□□□□ -1.54
NRD1P53617 YHL037CYHL037C 402 nt5.45□□□□□ -1.54
NRD1P53617 RFC2YJR068W 1062 nt5.45□□□□□ -1.54 RIP-Chip
NRD1P53617 RHO4YKR055W 876 nt5.45□□□□□ -1.54
NRD1P53617 SRP40YKR092C 1221 nt5.45□□□□□ -1.54
NRD1P53617 RHO2YNL090W 579 nt5.45□□□□□ -1.54 RIP-Chip
NRD1P53617 CAR1YPL111W 1002 nt5.45□□□□□ -1.54
NRD1P53617 ACC1YNR016C 6702 nt5.45□□□□□ -1.54
NRD1P53617 TEA1YOR337W 2280 nt5.45□□□□□ -1.54
NRD1P53617 HXT15YDL245C 1704 nt5.45□□□□□ -1.54
NRD1P53617 HXT16YJR158W 1704 nt5.45□□□□□ -1.54
NRD1P53617 PAP1YKR002W 1707 nt5.45□□□□□ -1.54
NRD1P53617 PPR1YLR014C 2715 nt5.45□□□□□ -1.54
NRD1P53617 DTD1YDL219W 453 nt5.44□□□□□ -1.54
NRD1P53617 RPT6YGL048C 1218 nt5.44□□□□□ -1.54
NRD1P53617 YIL060WYIL060W 435 nt5.44□□□□□ -1.54
NRD1P53617 YKL151CYKL151C 1014 nt5.44□□□□□ -1.54 RIP-Chip
NRD1P53617 ATG10YLL042C 504 nt5.44□□□□□ -1.54
NRD1P53617 YBL010CYBL010C 843 nt5.44□□□□□ -1.54
NRD1P53617 YMR173W-AYMR173W-A 1185 nt5.44□□□□□ -1.54 RIP-Chip
NRD1P53617 YNL144W-AYNL144W-A 84 nt5.44□□□□□ -1.54
NRD1P53617 ASH1YKL185W 1767 nt5.44□□□□□ -1.54
NRD1P53617 PRD1YCL057W 2139 nt5.44□□□□□ -1.54
NRD1P53617 HXT3YDR345C 1704 nt5.43□□□□□ -1.54 RIP-Chip
NRD1P53617 PHO8YDR481C 1701 nt5.43□□□□□ -1.54
NRD1P53617 DBP9YLR276C 1785 nt5.43□□□□□ -1.54
NRD1P53617 snR65snR65 100 nt5.43□□□□□ -1.54
NRD1P53617 TYW3YGL050W 822 nt5.43□□□□□ -1.54
NRD1P53617 YGR273CYGR273C 525 nt5.43□□□□□ -1.54
NRD1P53617 INN1YNL152W 1230 nt5.43□□□□□ -1.54
NRD1P53617 TYE7YOR344C 876 nt5.43□□□□□ -1.54 RIP-Chip
NRD1P53617 YPL014WYPL014W 1146 nt5.43□□□□□ -1.54 RIP-Chip
NRD1P53617 LPL1YOR059C 1353 nt5.42□□□□□ -1.54 RIP-Chip
NRD1P53617 TRP5YGL026C 2124 nt5.42□□□□□ -1.54
NRD1P53617 DAS1YJL149W 1992 nt5.42□□□□□ -1.54
NRD1P53617 HRP1YOL123W 1605 nt5.42□□□□□ -1.54
NRD1P53617 GAA1YLR088W 1845 nt5.42□□□□□ -1.54
NRD1P53617 PHO13YDL236W 939 nt5.42□□□□□ -1.54
NRD1P53617 COS4YFL062W 1140 nt5.42□□□□□ -1.54
NRD1P53617 YGR064WYGR064W 369 nt5.42□□□□□ -1.54
NRD1P53617 YHI9YHR029C 885 nt5.42□□□□□ -1.54
NRD1P53617 YAL068W-AYAL068W-A 255 nt5.42□□□□□ -1.54
NRD1P53617 VPS71YML041C 843 nt5.42□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 37.7 ms