Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC25A1P53007 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC25A1P53007 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC25A1P53007 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC25A1P53007 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.42■□□□□ 0.7
SLC25A1P53007 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC25A1P53007 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC25A1P53007 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC25A1P53007 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC25A1P53007 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC25A1P53007 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC25A1P53007 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC25A1P53007 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC25A1P53007 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC25A1P53007 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC25A1P53007 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC25A1P53007 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC25A1P53007 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC25A1P53007 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC25A1P53007 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC25A1P53007 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC25A1P53007 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC25A1P53007 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC25A1P53007 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC25A1P53007 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SLC25A1P53007 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC25A1P53007 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC25A1P53007 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC25A1P53007 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC25A1P53007 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC25A1P53007 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC25A1P53007 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC25A1P53007 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC25A1P53007 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC25A1P53007 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC25A1P53007 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC25A1P53007 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SLC25A1P53007 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC25A1P53007 UNC93B8-201ENST00000511903 705 ntBASIC19.4■□□□□ 0.7
SLC25A1P53007 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SLC25A1P53007 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC25A1P53007 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SLC25A1P53007 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC25A1P53007 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC25A1P53007 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC25A1P53007 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC25A1P53007 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC25A1P53007 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC25A1P53007 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC25A1P53007 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC25A1P53007 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC25A1P53007 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC25A1P53007 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC25A1P53007 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
SLC25A1P53007 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.39■□□□□ 0.69
SLC25A1P53007 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SLC25A1P53007 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SLC25A1P53007 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC25A1P53007 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC25A1P53007 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC25A1P53007 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC25A1P53007 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SLC25A1P53007 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.38■□□□□ 0.69
SLC25A1P53007 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC25A1P53007 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC25A1P53007 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC25A1P53007 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC25A1P53007 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC25A1P53007 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC25A1P53007 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC25A1P53007 AL031602.1-201ENST00000633169 911 ntBASIC19.37■□□□□ 0.69
SLC25A1P53007 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC25A1P53007 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC25A1P53007 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
SLC25A1P53007 FAM99A-202ENST00000538190 1989 ntBASIC19.37■□□□□ 0.69
SLC25A1P53007 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SLC25A1P53007 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC25A1P53007 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC25A1P53007 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SLC25A1P53007 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC25A1P53007 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC25A1P53007 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC25A1P53007 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC25A1P53007 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC25A1P53007 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC25A1P53007 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC25A1P53007 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC25A1P53007 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC25A1P53007 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.35■□□□□ 0.69
SLC25A1P53007 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC25A1P53007 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC25A1P53007 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC25A1P53007 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC25A1P53007 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SLC25A1P53007 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC25A1P53007 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC25A1P53007 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC25A1P53007 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC25A1P53007 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC25A1P53007 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms