Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CLCNKAP51800 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLCNKAP51800 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLCNKAP51800 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
CLCNKAP51800 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.42■■□□□ 1.02
CLCNKAP51800 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLCNKAP51800 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCNKAP51800 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCNKAP51800 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCNKAP51800 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCNKAP51800 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.41■■□□□ 1.02
CLCNKAP51800 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CLCNKAP51800 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
CLCNKAP51800 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLCNKAP51800 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.41■■□□□ 1.02
CLCNKAP51800 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCNKAP51800 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CLCNKAP51800 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLCNKAP51800 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.4■■□□□ 1.02
CLCNKAP51800 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCNKAP51800 AC123595.1-201ENST00000440769 1046 ntBASIC21.4■■□□□ 1.02
CLCNKAP51800 YBX1P1-201ENST00000445822 960 ntBASIC21.4■■□□□ 1.02
CLCNKAP51800 MIR5787-201ENST00000611784 55 ntBASIC21.4■■□□□ 1.02
CLCNKAP51800 AC105233.4-201ENST00000642045 216 ntBASIC21.4■■□□□ 1.02
CLCNKAP51800 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCNKAP51800 LINC01960-201ENST00000563759 1884 ntBASIC21.4■■□□□ 1.02
CLCNKAP51800 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCNKAP51800 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.4■■□□□ 1.02
CLCNKAP51800 OXCT2P1-201ENST00000447263 1535 ntBASIC21.39■■□□□ 1.02
CLCNKAP51800 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.39■■□□□ 1.02
CLCNKAP51800 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLCNKAP51800 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLCNKAP51800 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.02
CLCNKAP51800 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLCNKAP51800 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.39■■□□□ 1.01
CLCNKAP51800 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCNKAP51800 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.39■■□□□ 1.01
CLCNKAP51800 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.39■■□□□ 1.01
CLCNKAP51800 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLCNKAP51800 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.39■■□□□ 1.01
CLCNKAP51800 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CLCNKAP51800 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCNKAP51800 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCNKAP51800 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
CLCNKAP51800 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.39■■□□□ 1.01
CLCNKAP51800 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.39■■□□□ 1.01
CLCNKAP51800 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCNKAP51800 C9orf163-202ENST00000624034 2573 ntBASIC21.39■■□□□ 1.01
CLCNKAP51800 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCNKAP51800 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.38■■□□□ 1.01
CLCNKAP51800 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CLCNKAP51800 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.38■■□□□ 1.01
CLCNKAP51800 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.38■■□□□ 1.01
CLCNKAP51800 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCNKAP51800 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCNKAP51800 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.38■■□□□ 1.01
CLCNKAP51800 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
CLCNKAP51800 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCNKAP51800 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCNKAP51800 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.38■■□□□ 1.01
CLCNKAP51800 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.37■■□□□ 1.01
CLCNKAP51800 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKAP51800 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKAP51800 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKAP51800 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.37■■□□□ 1.01
CLCNKAP51800 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKAP51800 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKAP51800 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.37■■□□□ 1.01
CLCNKAP51800 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKAP51800 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKAP51800 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCNKAP51800 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.37■■□□□ 1.01
CLCNKAP51800 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
CLCNKAP51800 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCNKAP51800 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.36■■□□□ 1.01
CLCNKAP51800 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCNKAP51800 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CLCNKAP51800 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.36■■□□□ 1.01
CLCNKAP51800 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLCNKAP51800 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLCNKAP51800 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.36■■□□□ 1.01
CLCNKAP51800 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.36■■□□□ 1.01
CLCNKAP51800 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.36■■□□□ 1.01
CLCNKAP51800 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.36■■□□□ 1.01
CLCNKAP51800 AC087623.3-201ENST00000607047 1098 ntBASIC21.36■■□□□ 1.01
CLCNKAP51800 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CLCNKAP51800 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.36■■□□□ 1.01
CLCNKAP51800 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCNKAP51800 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCNKAP51800 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CLCNKAP51800 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.35■■□□□ 1.01
CLCNKAP51800 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.35■■□□□ 1.01
CLCNKAP51800 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CLCNKAP51800 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCNKAP51800 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CLCNKAP51800 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CLCNKAP51800 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCNKAP51800 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CLCNKAP51800 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCNKAP51800 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms