Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSR4P51571 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SSR4P51571 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSR4P51571 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.06■□□□□ 0.8
SSR4P51571 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SSR4P51571 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSR4P51571 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SSR4P51571 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSR4P51571 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSR4P51571 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SSR4P51571 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
SSR4P51571 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SSR4P51571 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SSR4P51571 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SSR4P51571 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSR4P51571 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.05■□□□□ 0.8
SSR4P51571 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.05■□□□□ 0.8
SSR4P51571 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SSR4P51571 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.05■□□□□ 0.8
SSR4P51571 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.05■□□□□ 0.8
SSR4P51571 LINC02228-203ENST00000641970 1355 ntBASIC20.05■□□□□ 0.8
SSR4P51571 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSR4P51571 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.04■□□□□ 0.8
SSR4P51571 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSR4P51571 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSR4P51571 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SSR4P51571 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSR4P51571 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSR4P51571 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.04■□□□□ 0.8
SSR4P51571 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
SSR4P51571 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.04■□□□□ 0.8
SSR4P51571 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.04■□□□□ 0.8
SSR4P51571 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SSR4P51571 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SSR4P51571 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.04■□□□□ 0.8
SSR4P51571 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSR4P51571 SMUG1P1-201ENST00000590640 811 ntBASIC20.04■□□□□ 0.8
SSR4P51571 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.04■□□□□ 0.8
SSR4P51571 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSR4P51571 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SSR4P51571 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSR4P51571 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSR4P51571 AL162430.1-201ENST00000480705 870 ntBASIC20.03■□□□□ 0.8
SSR4P51571 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.03■□□□□ 0.8
SSR4P51571 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SSR4P51571 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SSR4P51571 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.03■□□□□ 0.8
SSR4P51571 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SSR4P51571 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.03■□□□□ 0.8
SSR4P51571 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.02■□□□□ 0.8
SSR4P51571 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR4P51571 DUSP8P5-201ENST00000422884 1815 ntBASIC20.02■□□□□ 0.8
SSR4P51571 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR4P51571 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR4P51571 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR4P51571 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR4P51571 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR4P51571 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR4P51571 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.02■□□□□ 0.8
SSR4P51571 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.02■□□□□ 0.8
SSR4P51571 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SSR4P51571 CCDC92B-201ENST00000575506 885 ntBASIC20.02■□□□□ 0.8
SSR4P51571 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR4P51571 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SSR4P51571 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SSR4P51571 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SSR4P51571 BX005040.4-201ENST00000637145 1518 ntBASIC20.02■□□□□ 0.79
SSR4P51571 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR4P51571 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSR4P51571 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR4P51571 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSR4P51571 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR4P51571 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.01■□□□□ 0.79
SSR4P51571 AC104564.3-201ENST00000582367 638 ntBASIC20.01■□□□□ 0.79
SSR4P51571 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SSR4P51571 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR4P51571 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SSR4P51571 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR4P51571 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSR4P51571 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR4P51571 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR4P51571 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR4P51571 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR4P51571 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSR4P51571 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SSR4P51571 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SSR4P51571 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSR4P51571 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
SSR4P51571 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SSR4P51571 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20■□□□□ 0.79
SSR4P51571 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20■□□□□ 0.79
SSR4P51571 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSR4P51571 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSR4P51571 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20■□□□□ 0.79
SSR4P51571 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20■□□□□ 0.79
SSR4P51571 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SSR4P51571 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SSR4P51571 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SSR4P51571 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR4P51571 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms