Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.97■□□□□ 0.47
THBS3P49746 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.97■□□□□ 0.47
THBS3P49746 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.97■□□□□ 0.47
THBS3P49746 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.97■□□□□ 0.47
THBS3P49746 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.97■□□□□ 0.47
THBS3P49746 AC009102.2-201ENST00000606772 1639 ntBASIC17.97■□□□□ 0.47
THBS3P49746 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
THBS3P49746 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
THBS3P49746 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
THBS3P49746 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.96■□□□□ 0.47
THBS3P49746 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
THBS3P49746 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
THBS3P49746 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
THBS3P49746 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
THBS3P49746 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
THBS3P49746 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.96■□□□□ 0.47
THBS3P49746 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.96■□□□□ 0.47
THBS3P49746 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.96■□□□□ 0.47
THBS3P49746 AL117332.1-201ENST00000622628 974 ntBASIC17.96■□□□□ 0.47
THBS3P49746 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
THBS3P49746 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
THBS3P49746 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
THBS3P49746 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.95■□□□□ 0.46
THBS3P49746 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
THBS3P49746 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
THBS3P49746 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
THBS3P49746 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.95■□□□□ 0.46
THBS3P49746 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
THBS3P49746 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
THBS3P49746 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.95■□□□□ 0.46
THBS3P49746 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
THBS3P49746 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
THBS3P49746 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
THBS3P49746 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
THBS3P49746 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
THBS3P49746 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
THBS3P49746 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
THBS3P49746 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.94■□□□□ 0.46
THBS3P49746 AC131281.2-201ENST00000520478 145 ntBASIC17.94■□□□□ 0.46
THBS3P49746 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.94■□□□□ 0.46
THBS3P49746 MIR3621-201ENST00000580529 85 ntBASIC17.94■□□□□ 0.46
THBS3P49746 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
THBS3P49746 AL356740.2-201ENST00000601559 647 ntBASIC17.94■□□□□ 0.46
THBS3P49746 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
THBS3P49746 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
THBS3P49746 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
THBS3P49746 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
THBS3P49746 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.94■□□□□ 0.46
THBS3P49746 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
THBS3P49746 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
THBS3P49746 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
THBS3P49746 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
THBS3P49746 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
THBS3P49746 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
THBS3P49746 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
THBS3P49746 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
THBS3P49746 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
THBS3P49746 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
THBS3P49746 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
THBS3P49746 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
THBS3P49746 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.93■□□□□ 0.46
THBS3P49746 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
THBS3P49746 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
THBS3P49746 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
THBS3P49746 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
THBS3P49746 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.93■□□□□ 0.46
THBS3P49746 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
THBS3P49746 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
THBS3P49746 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
THBS3P49746 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
THBS3P49746 AC087742.1-201ENST00000575880 1738 ntBASIC17.92■□□□□ 0.46
THBS3P49746 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
THBS3P49746 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
THBS3P49746 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.92■□□□□ 0.46
THBS3P49746 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
THBS3P49746 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
THBS3P49746 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
THBS3P49746 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.92■□□□□ 0.46
THBS3P49746 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.92■□□□□ 0.46
THBS3P49746 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
THBS3P49746 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
THBS3P49746 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
THBS3P49746 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
THBS3P49746 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.92■□□□□ 0.46
THBS3P49746 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
THBS3P49746 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
THBS3P49746 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
THBS3P49746 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
THBS3P49746 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
THBS3P49746 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
THBS3P49746 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
THBS3P49746 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
THBS3P49746 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
THBS3P49746 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
THBS3P49746 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
THBS3P49746 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.91■□□□□ 0.46
THBS3P49746 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
THBS3P49746 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
THBS3P49746 C17orf82-201ENST00000623772 1530 ntBASIC17.91■□□□□ 0.46
THBS3P49746 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms