Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.26■□□□□ 0.67
SRP9P49458 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.26■□□□□ 0.67
SRP9P49458 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRP9P49458 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SRP9P49458 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.26■□□□□ 0.67
SRP9P49458 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.26■□□□□ 0.67
SRP9P49458 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.26■□□□□ 0.67
SRP9P49458 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SRP9P49458 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.26■□□□□ 0.67
SRP9P49458 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRP9P49458 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.25■□□□□ 0.67
SRP9P49458 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRP9P49458 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRP9P49458 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRP9P49458 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRP9P49458 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRP9P49458 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRP9P49458 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRP9P49458 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRP9P49458 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRP9P49458 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SRP9P49458 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRP9P49458 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRP9P49458 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRP9P49458 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRP9P49458 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.25■□□□□ 0.67
SRP9P49458 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SRP9P49458 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRP9P49458 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SRP9P49458 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SRP9P49458 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRP9P49458 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRP9P49458 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRP9P49458 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SRP9P49458 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SRP9P49458 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.24■□□□□ 0.67
SRP9P49458 AC131212.1-201ENST00000613771 668 ntBASIC19.24■□□□□ 0.67
SRP9P49458 AL117332.1-201ENST00000622628 974 ntBASIC19.24■□□□□ 0.67
SRP9P49458 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.24■□□□□ 0.67
SRP9P49458 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRP9P49458 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRP9P49458 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SRP9P49458 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRP9P49458 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.24■□□□□ 0.67
SRP9P49458 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRP9P49458 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRP9P49458 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SRP9P49458 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SRP9P49458 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRP9P49458 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.23■□□□□ 0.67
SRP9P49458 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SRP9P49458 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SRP9P49458 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.23■□□□□ 0.67
SRP9P49458 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRP9P49458 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.23■□□□□ 0.67
SRP9P49458 MIR3621-201ENST00000580529 85 ntBASIC19.23■□□□□ 0.67
SRP9P49458 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.23■□□□□ 0.67
SRP9P49458 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SRP9P49458 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.23■□□□□ 0.67
SRP9P49458 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.23■□□□□ 0.67
SRP9P49458 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRP9P49458 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.23■□□□□ 0.67
SRP9P49458 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SRP9P49458 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRP9P49458 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRP9P49458 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SRP9P49458 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRP9P49458 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRP9P49458 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.22■□□□□ 0.67
SRP9P49458 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.22■□□□□ 0.67
SRP9P49458 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SRP9P49458 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SRP9P49458 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.22■□□□□ 0.67
SRP9P49458 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRP9P49458 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRP9P49458 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRP9P49458 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SRP9P49458 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.22■□□□□ 0.67
SRP9P49458 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRP9P49458 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SRP9P49458 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SRP9P49458 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRP9P49458 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
SRP9P49458 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRP9P49458 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRP9P49458 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SRP9P49458 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.21■□□□□ 0.67
SRP9P49458 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.21■□□□□ 0.67
SRP9P49458 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SRP9P49458 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRP9P49458 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
SRP9P49458 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SRP9P49458 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRP9P49458 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.2■□□□□ 0.66
SRP9P49458 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRP9P49458 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRP9P49458 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRP9P49458 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.2■□□□□ 0.66
SRP9P49458 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.2■□□□□ 0.66
SRP9P49458 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms