Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SLC9A3P48764 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC9A3P48764 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC9A3P48764 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
SLC9A3P48764 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC9A3P48764 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC9A3P48764 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
SLC9A3P48764 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC9A3P48764 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.92■□□□□ 0.78
SLC9A3P48764 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC9A3P48764 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SLC9A3P48764 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC9A3P48764 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC9A3P48764 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC9A3P48764 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC9A3P48764 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC9A3P48764 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SLC9A3P48764 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC9A3P48764 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC9A3P48764 AC080038.3-201ENST00000623346 1952 ntBASIC19.92■□□□□ 0.78
SLC9A3P48764 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC9A3P48764 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC9A3P48764 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC9A3P48764 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.91■□□□□ 0.78
SLC9A3P48764 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC9A3P48764 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SLC9A3P48764 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC9A3P48764 AC009299.2-201ENST00000482477 511 ntBASIC19.91■□□□□ 0.78
SLC9A3P48764 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC9A3P48764 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC9A3P48764 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC9A3P48764 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC9A3P48764 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC9A3P48764 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SLC9A3P48764 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.91■□□□□ 0.78
SLC9A3P48764 C17orf82-201ENST00000623772 1530 ntBASIC19.91■□□□□ 0.78
SLC9A3P48764 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.91■□□□□ 0.78
SLC9A3P48764 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC9A3P48764 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC9A3P48764 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC9A3P48764 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC9A3P48764 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC9A3P48764 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC9A3P48764 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC9A3P48764 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC9A3P48764 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC9A3P48764 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC9A3P48764 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC9A3P48764 TSPY9P-201ENST00000440215 945 ntBASIC19.9■□□□□ 0.78
SLC9A3P48764 TSPY11P-201ENST00000442607 1045 ntBASIC19.9■□□□□ 0.78
SLC9A3P48764 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC9A3P48764 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC9A3P48764 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC9A3P48764 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC9A3P48764 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC9A3P48764 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC9A3P48764 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SLC9A3P48764 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC9A3P48764 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC9A3P48764 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC9A3P48764 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC9A3P48764 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC9A3P48764 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC9A3P48764 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.89■□□□□ 0.77
SLC9A3P48764 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC9A3P48764 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC9A3P48764 LINC01960-201ENST00000563759 1884 ntBASIC19.89■□□□□ 0.77
SLC9A3P48764 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.89■□□□□ 0.77
SLC9A3P48764 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC9A3P48764 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC9A3P48764 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC9A3P48764 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC9A3P48764 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SLC9A3P48764 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SLC9A3P48764 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SLC9A3P48764 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC9A3P48764 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC9A3P48764 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC9A3P48764 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC9A3P48764 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SLC9A3P48764 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC9A3P48764 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC9A3P48764 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC9A3P48764 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SLC9A3P48764 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.87■□□□□ 0.77
SLC9A3P48764 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SLC9A3P48764 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.87■□□□□ 0.77
SLC9A3P48764 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC9A3P48764 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC9A3P48764 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC9A3P48764 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.87■□□□□ 0.77
SLC9A3P48764 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC9A3P48764 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.87■□□□□ 0.77
SLC9A3P48764 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC9A3P48764 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC9A3P48764 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SLC9A3P48764 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC9A3P48764 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SLC9A3P48764 AL451085.2-201ENST00000605085 799 ntBASIC19.86■□□□□ 0.77
SLC9A3P48764 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms