Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GABRA4P48169 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GABRA4P48169 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GABRA4P48169 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GABRA4P48169 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
GABRA4P48169 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
GABRA4P48169 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GABRA4P48169 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GABRA4P48169 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.79■□□□□ 0.92
GABRA4P48169 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GABRA4P48169 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.79■□□□□ 0.92
GABRA4P48169 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GABRA4P48169 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GABRA4P48169 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GABRA4P48169 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GABRA4P48169 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GABRA4P48169 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GABRA4P48169 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GABRA4P48169 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GABRA4P48169 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GABRA4P48169 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GABRA4P48169 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GABRA4P48169 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GABRA4P48169 AC034268.1-201ENST00000441047 882 ntBASIC20.78■□□□□ 0.92
GABRA4P48169 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.78■□□□□ 0.92
GABRA4P48169 CCDC92B-201ENST00000575506 885 ntBASIC20.78■□□□□ 0.92
GABRA4P48169 TERF1P2-201ENST00000583350 1212 ntBASIC20.78■□□□□ 0.92
GABRA4P48169 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.78■□□□□ 0.92
GABRA4P48169 TPRG1LP1-201ENST00000598702 760 ntBASIC20.78■□□□□ 0.92
GABRA4P48169 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
GABRA4P48169 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.77■□□□□ 0.92
GABRA4P48169 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.77■□□□□ 0.92
GABRA4P48169 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GABRA4P48169 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
GABRA4P48169 DUSP8P5-201ENST00000422884 1815 ntBASIC20.77■□□□□ 0.92
GABRA4P48169 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GABRA4P48169 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GABRA4P48169 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
GABRA4P48169 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
GABRA4P48169 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
GABRA4P48169 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
GABRA4P48169 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
GABRA4P48169 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
GABRA4P48169 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GABRA4P48169 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GABRA4P48169 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GABRA4P48169 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.76■□□□□ 0.91
GABRA4P48169 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.76■□□□□ 0.91
GABRA4P48169 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GABRA4P48169 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
GABRA4P48169 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
GABRA4P48169 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.75■□□□□ 0.91
GABRA4P48169 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
GABRA4P48169 LINC02228-203ENST00000641970 1355 ntBASIC20.75■□□□□ 0.91
GABRA4P48169 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
GABRA4P48169 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GABRA4P48169 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.75■□□□□ 0.91
GABRA4P48169 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.75■□□□□ 0.91
GABRA4P48169 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GABRA4P48169 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.75■□□□□ 0.91
GABRA4P48169 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GABRA4P48169 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.75■□□□□ 0.91
GABRA4P48169 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GABRA4P48169 BX005040.4-201ENST00000637145 1518 ntBASIC20.74■□□□□ 0.91
GABRA4P48169 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
GABRA4P48169 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GABRA4P48169 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
GABRA4P48169 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
GABRA4P48169 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GABRA4P48169 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GABRA4P48169 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GABRA4P48169 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GABRA4P48169 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GABRA4P48169 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.73■□□□□ 0.91
GABRA4P48169 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.73■□□□□ 0.91
GABRA4P48169 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
GABRA4P48169 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.73■□□□□ 0.91
GABRA4P48169 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
GABRA4P48169 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
GABRA4P48169 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
GABRA4P48169 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
GABRA4P48169 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GABRA4P48169 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
GABRA4P48169 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.72■□□□□ 0.91
GABRA4P48169 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.72■□□□□ 0.91
GABRA4P48169 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
GABRA4P48169 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
GABRA4P48169 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
GABRA4P48169 KRT18P5-201ENST00000436075 1291 ntBASIC20.72■□□□□ 0.91
GABRA4P48169 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.72■□□□□ 0.91
GABRA4P48169 AC079089.2-201ENST00000531211 1277 ntBASIC20.72■□□□□ 0.91
GABRA4P48169 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.72■□□□□ 0.91
GABRA4P48169 KRT18P14-201ENST00000534205 1250 ntBASIC20.72■□□□□ 0.91
GABRA4P48169 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.72■□□□□ 0.91
GABRA4P48169 AC104564.3-201ENST00000582367 638 ntBASIC20.72■□□□□ 0.91
GABRA4P48169 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
GABRA4P48169 AC087742.1-201ENST00000575880 1738 ntBASIC20.72■□□□□ 0.91
GABRA4P48169 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.72■□□□□ 0.91
GABRA4P48169 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GABRA4P48169 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms