Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 TAF1YGR274C 3201 nt3.11□□□□□ -1.91
CUP9P41817 RRP5YMR229C 5190 nt3.11□□□□□ -1.91
CUP9P41817 STE6YKL209C 3873 nt3.11□□□□□ -1.91
CUP9P41817 VPS30YPL120W 1674 nt3.11□□□□□ -1.91
CUP9P41817 MYO3YKL129C 3819 nt3.1□□□□□ -1.91
CUP9P41817 YDR526CYDR526C 471 nt3.1□□□□□ -1.91
CUP9P41817 OSH3YHR073W 2991 nt3.1□□□□□ -1.91
CUP9P41817 HCA4YJL033W 2313 nt3.1□□□□□ -1.91
CUP9P41817 STV1YMR054W 2673 nt3.1□□□□□ -1.91
CUP9P41817 SYF1YDR416W 2580 nt3.09□□□□□ -1.91
CUP9P41817 DHH1YDL160C 1521 nt3.09□□□□□ -1.91
CUP9P41817 ATG32YIL146C 1590 nt3.09□□□□□ -1.91
CUP9P41817 YDR444WYDR444W 2064 nt3.09□□□□□ -1.91
CUP9P41817 YCR050CYCR050C 309 nt3.09□□□□□ -1.91
CUP9P41817 INO2YDR123C 915 nt3.09□□□□□ -1.91
CUP9P41817 YLR122CYLR122C 378 nt3.09□□□□□ -1.91
CUP9P41817 RSA3YLR221C 663 nt3.09□□□□□ -1.91
CUP9P41817 RIM11YMR139W 1113 nt3.09□□□□□ -1.91
CUP9P41817 IBD2YNL164C 1056 nt3.09□□□□□ -1.91
CUP9P41817 RAD17YOR368W 1206 nt3.09□□□□□ -1.91
CUP9P41817 YAR1YPL239W 603 nt3.09□□□□□ -1.91
CUP9P41817 IME4YGL192W 1803 nt3.09□□□□□ -1.92
CUP9P41817 ASI1YMR119W 1875 nt3.09□□□□□ -1.92
CUP9P41817 YDR132CYDR132C 1488 nt3.09□□□□□ -1.92
CUP9P41817 SHQ1YIL104C 1524 nt3.09□□□□□ -1.92
CUP9P41817 SET4YJL105W 1683 nt3.08□□□□□ -1.92
CUP9P41817 SWP82YFL049W 1872 nt3.08□□□□□ -1.92
CUP9P41817 MRPL11YDL202W 750 nt3.08□□□□□ -1.92
CUP9P41817 GEP4YHR100C 558 nt3.08□□□□□ -1.92
CUP9P41817 AGE2YIL044C 897 nt3.08□□□□□ -1.92
CUP9P41817 PRM9YAR031W 897 nt3.08□□□□□ -1.92
CUP9P41817 YBL029WYBL029W 1131 nt3.08□□□□□ -1.92
CUP9P41817 YBR053CYBR053C 1077 nt3.08□□□□□ -1.92
CUP9P41817 MRPL51YPR100W 423 nt3.08□□□□□ -1.92
CUP9P41817 YBR134WYBR134W 402 nt3.08□□□□□ -1.92
CUP9P41817 DXO1YDR370C 1329 nt3.08□□□□□ -1.92
CUP9P41817 LCB5YLR260W 2064 nt3.08□□□□□ -1.92
CUP9P41817 TED1YIL039W 1422 nt3.08□□□□□ -1.92
CUP9P41817 SOF1YLL011W 1470 nt3.08□□□□□ -1.92
CUP9P41817 EMC1YCL045C 2283 nt3.08□□□□□ -1.92
CUP9P41817 NSP1YJL041W 2472 nt3.08□□□□□ -1.92
CUP9P41817 MSN4YKL062W 1893 nt3.07□□□□□ -1.92
CUP9P41817 SPT16YGL207W 3108 nt3.07□□□□□ -1.92
CUP9P41817 RAD26YJR035W 3258 nt3.07□□□□□ -1.92
CUP9P41817 PCL6YER059W 1263 nt3.07□□□□□ -1.92
CUP9P41817 SPC42YKL042W 1092 nt3.07□□□□□ -1.92
CUP9P41817 MMM1YLL006W 1281 nt3.07□□□□□ -1.92
CUP9P41817 ALG5YPL227C 1005 nt3.07□□□□□ -1.92
CUP9P41817 RPS9BYBR189W 588 nt3.07□□□□□ -1.92
CUP9P41817 MSR1YHR091C 1932 nt3.07□□□□□ -1.92
CUP9P41817 AI5_BETAQ0075 1065 nt3.06□□□□□ -1.92
CUP9P41817 PEP7YDR323C 1548 nt3.06□□□□□ -1.92
CUP9P41817 ERJ5YFR041C 888 nt3.06□□□□□ -1.92
CUP9P41817 YGL193CYGL193C 312 nt3.06□□□□□ -1.92
CUP9P41817 SKI8YGL213C 1194 nt3.06□□□□□ -1.92
CUP9P41817 YGR079WYGR079W 1113 nt3.06□□□□□ -1.92
CUP9P41817 AIM22YJL046W 1230 nt3.06□□□□□ -1.92
CUP9P41817 BCH2YKR027W 2298 nt3.06□□□□□ -1.92
CUP9P41817 IRC25YLR021W 540 nt3.06□□□□□ -1.92
CUP9P41817 SCD6YPR129W 1050 nt3.06□□□□□ -1.92
CUP9P41817 HEF3YNL014W 3135 nt3.06□□□□□ -1.92
CUP9P41817 ALA1YOR335C 2877 nt3.06□□□□□ -1.92
CUP9P41817 EXO5YBR163W 1758 nt3.05□□□□□ -1.92
CUP9P41817 VPS36YLR417W 1701 nt3.05□□□□□ -1.92
CUP9P41817 YEL009C-AYEL009C-A 408 nt3.05□□□□□ -1.92
CUP9P41817 RPS8BYER102W 603 nt3.05□□□□□ -1.92
CUP9P41817 YLR428CYLR428C 345 nt3.05□□□□□ -1.92
CUP9P41817 TPP1YMR156C 717 nt3.05□□□□□ -1.92
CUP9P41817 RPS8AYBL072C 603 nt3.05□□□□□ -1.92
CUP9P41817 RRP36YOR287C 903 nt3.05□□□□□ -1.92
CUP9P41817 snR17asnR17a 333 nt3.05□□□□□ -1.92
CUP9P41817 UBP10YNL186W 2379 nt3.05□□□□□ -1.92
CUP9P41817 REB1YBR049C 2433 nt3.04□□□□□ -1.92
CUP9P41817 BOI2YER114C 3123 nt3.04□□□□□ -1.92
CUP9P41817 SWI1YPL016W 3945 nt3.04□□□□□ -1.92
CUP9P41817 PDX1YGR193C 1233 nt3.04□□□□□ -1.92
CUP9P41817 MED7YOL135C 669 nt3.04□□□□□ -1.92
CUP9P41817 ARR1YPR199C 885 nt3.04□□□□□ -1.92
CUP9P41817 APL4YPR029C 2499 nt3.04□□□□□ -1.92
CUP9P41817 RPA135YPR010C 3612 nt3.04□□□□□ -1.92
CUP9P41817 ARO9YHR137W 1542 nt3.03□□□□□ -1.92
CUP9P41817 HOS2YGL194C 1359 nt3.03□□□□□ -1.92
CUP9P41817 RTS1YOR014W 2274 nt3.03□□□□□ -1.92
CUP9P41817 DEG1YFL001W 1329 nt3.03□□□□□ -1.92
CUP9P41817 DIN7YDR263C 1293 nt3.03□□□□□ -1.92
CUP9P41817 SLX8YER116C 825 nt3.03□□□□□ -1.92
CUP9P41817 YHL026CYHL026C 948 nt3.03□□□□□ -1.92
CUP9P41817 AHP1YLR109W 531 nt3.03□□□□□ -1.92
CUP9P41817 SPA2YLL021W 4401 nt3.03□□□□□ -1.92
CUP9P41817 PHO12YHR215W 1404 nt3.02□□□□□ -1.93
CUP9P41817 PHO11YAR071W 1404 nt3.02□□□□□ -1.93
CUP9P41817 IOC4YMR044W 1428 nt3.02□□□□□ -1.93
CUP9P41817 FLO10YKR102W 3510 nt3.02□□□□□ -1.93
CUP9P41817 PHM6YDR281C 315 nt3.02□□□□□ -1.93
CUP9P41817 MRPL25YGR076C 474 nt3.02□□□□□ -1.93
CUP9P41817 ARG80YMR042W 534 nt3.02□□□□□ -1.93
CUP9P41817 YLR345WYLR345W 1530 nt3.02□□□□□ -1.93
CUP9P41817 DAN4YJR151C 3486 nt3.02□□□□□ -1.93
CUP9P41817 MNT4YNR059W 1743 nt3.02□□□□□ -1.93
CUP9P41817 RPA190YOR341W 4995 nt3.01□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 16.2 ms