Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 OXCT2P1-201ENST00000447263 1535 ntBASIC17.67■□□□□ 0.42
SAA4P35542 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SAA4P35542 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SAA4P35542 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SAA4P35542 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.67■□□□□ 0.42
SAA4P35542 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SAA4P35542 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SAA4P35542 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.67■□□□□ 0.42
SAA4P35542 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.67■□□□□ 0.42
SAA4P35542 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SAA4P35542 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SAA4P35542 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.67■□□□□ 0.42
SAA4P35542 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.67■□□□□ 0.42
SAA4P35542 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SAA4P35542 DUSP8P5-201ENST00000422884 1815 ntBASIC17.67■□□□□ 0.42
SAA4P35542 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SAA4P35542 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SAA4P35542 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SAA4P35542 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SAA4P35542 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SAA4P35542 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.66■□□□□ 0.42
SAA4P35542 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SAA4P35542 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SAA4P35542 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SAA4P35542 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SAA4P35542 AC123595.1-201ENST00000440769 1046 ntBASIC17.66■□□□□ 0.42
SAA4P35542 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.66■□□□□ 0.42
SAA4P35542 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.66■□□□□ 0.42
SAA4P35542 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.66■□□□□ 0.42
SAA4P35542 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SAA4P35542 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SAA4P35542 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SAA4P35542 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SAA4P35542 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SAA4P35542 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.65■□□□□ 0.42
SAA4P35542 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.65■□□□□ 0.42
SAA4P35542 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.65■□□□□ 0.42
SAA4P35542 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SAA4P35542 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SAA4P35542 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
SAA4P35542 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SAA4P35542 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.64■□□□□ 0.42
SAA4P35542 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
SAA4P35542 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SAA4P35542 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SAA4P35542 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.64■□□□□ 0.41
SAA4P35542 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.64■□□□□ 0.41
SAA4P35542 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.64■□□□□ 0.41
SAA4P35542 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SAA4P35542 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SAA4P35542 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.64■□□□□ 0.41
SAA4P35542 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
SAA4P35542 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SAA4P35542 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SAA4P35542 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SAA4P35542 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SAA4P35542 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SAA4P35542 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.63■□□□□ 0.41
SAA4P35542 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SAA4P35542 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SAA4P35542 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.63■□□□□ 0.41
SAA4P35542 AC034268.1-201ENST00000441047 882 ntBASIC17.63■□□□□ 0.41
SAA4P35542 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SAA4P35542 SMUG1P1-201ENST00000590640 811 ntBASIC17.63■□□□□ 0.41
SAA4P35542 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.63■□□□□ 0.41
SAA4P35542 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.63■□□□□ 0.41
SAA4P35542 LINC02228-203ENST00000641970 1355 ntBASIC17.63■□□□□ 0.41
SAA4P35542 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SAA4P35542 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SAA4P35542 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.63■□□□□ 0.41
SAA4P35542 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SAA4P35542 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SAA4P35542 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.62■□□□□ 0.41
SAA4P35542 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SAA4P35542 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SAA4P35542 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SAA4P35542 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SAA4P35542 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SAA4P35542 AL162430.1-201ENST00000480705 870 ntBASIC17.62■□□□□ 0.41
SAA4P35542 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SAA4P35542 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.62■□□□□ 0.41
SAA4P35542 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SAA4P35542 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SAA4P35542 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SAA4P35542 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SAA4P35542 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SAA4P35542 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SAA4P35542 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SAA4P35542 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.61■□□□□ 0.41
SAA4P35542 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
SAA4P35542 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SAA4P35542 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SAA4P35542 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SAA4P35542 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SAA4P35542 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.61■□□□□ 0.41
SAA4P35542 CCDC92B-201ENST00000575506 885 ntBASIC17.61■□□□□ 0.41
SAA4P35542 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.61■□□□□ 0.41
SAA4P35542 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SAA4P35542 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
SAA4P35542 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms