Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.82■■□□□ 1.4
KRT9P35527 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.82■■□□□ 1.4
KRT9P35527 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KRT9P35527 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KRT9P35527 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KRT9P35527 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
KRT9P35527 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.82■■□□□ 1.4
KRT9P35527 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.82■■□□□ 1.4
KRT9P35527 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KRT9P35527 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KRT9P35527 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KRT9P35527 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KRT9P35527 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
KRT9P35527 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KRT9P35527 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.82■■□□□ 1.4
KRT9P35527 AC009102.2-201ENST00000606772 1639 ntBASIC23.81■■□□□ 1.4
KRT9P35527 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KRT9P35527 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KRT9P35527 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.81■■□□□ 1.4
KRT9P35527 DUX4L4-201ENST00000566884 1269 ntBASIC23.81■■□□□ 1.4
KRT9P35527 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.81■■□□□ 1.4
KRT9P35527 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
KRT9P35527 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.81■■□□□ 1.4
KRT9P35527 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
KRT9P35527 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KRT9P35527 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KRT9P35527 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KRT9P35527 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KRT9P35527 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.8■■□□□ 1.4
KRT9P35527 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
KRT9P35527 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.8■■□□□ 1.4
KRT9P35527 AC009086.3-201ENST00000623486 1008 ntBASIC23.8■■□□□ 1.4
KRT9P35527 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.8■■□□□ 1.4
KRT9P35527 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KRT9P35527 PKD1P6-201ENST00000343738 4769 ntBASIC23.8■■□□□ 1.4
KRT9P35527 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
KRT9P35527 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT9P35527 AC010542.4-201ENST00000563151 1910 ntBASIC23.79■■□□□ 1.4
KRT9P35527 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.79■■□□□ 1.4
KRT9P35527 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT9P35527 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT9P35527 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.79■■□□□ 1.4
KRT9P35527 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.79■■□□□ 1.4
KRT9P35527 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.79■■□□□ 1.4
KRT9P35527 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.79■■□□□ 1.4
KRT9P35527 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.79■■□□□ 1.4
KRT9P35527 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.79■■□□□ 1.4
KRT9P35527 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT9P35527 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.79■■□□□ 1.4
KRT9P35527 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT9P35527 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT9P35527 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT9P35527 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT9P35527 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KRT9P35527 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
KRT9P35527 AC026310.3-201ENST00000625186 2373 ntBASIC23.78■■□□□ 1.4
KRT9P35527 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
KRT9P35527 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KRT9P35527 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KRT9P35527 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
KRT9P35527 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
KRT9P35527 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
KRT9P35527 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KRT9P35527 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.78■■□□□ 1.4
KRT9P35527 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.77■■□□□ 1.4
KRT9P35527 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
KRT9P35527 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT9P35527 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT9P35527 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT9P35527 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT9P35527 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
KRT9P35527 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT9P35527 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT9P35527 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.77■■□□□ 1.4
KRT9P35527 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT9P35527 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.77■■□□□ 1.4
KRT9P35527 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.77■■□□□ 1.4
KRT9P35527 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT9P35527 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
KRT9P35527 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
KRT9P35527 FAM99A-202ENST00000538190 1989 ntBASIC23.76■■□□□ 1.39
KRT9P35527 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.76■■□□□ 1.39
KRT9P35527 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.76■■□□□ 1.39
KRT9P35527 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
KRT9P35527 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
KRT9P35527 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
KRT9P35527 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KRT9P35527 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
KRT9P35527 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
KRT9P35527 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.75■■□□□ 1.39
KRT9P35527 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
KRT9P35527 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
KRT9P35527 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KRT9P35527 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KRT9P35527 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KRT9P35527 AL356740.2-201ENST00000601559 647 ntBASIC23.75■■□□□ 1.39
KRT9P35527 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.75■■□□□ 1.39
KRT9P35527 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
KRT9P35527 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.75■■□□□ 1.39
KRT9P35527 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms