Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCND1P24385 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCND1P24385 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCND1P24385 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCND1P24385 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCND1P24385 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.85■■□□□ 1.09
CCND1P24385 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCND1P24385 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.85■■□□□ 1.09
CCND1P24385 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCND1P24385 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCND1P24385 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCND1P24385 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCND1P24385 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCND1P24385 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCND1P24385 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.85■■□□□ 1.09
CCND1P24385 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCND1P24385 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCND1P24385 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCND1P24385 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CCND1P24385 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCND1P24385 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CCND1P24385 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCND1P24385 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCND1P24385 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.84■■□□□ 1.09
CCND1P24385 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.84■■□□□ 1.09
CCND1P24385 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CCND1P24385 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CCND1P24385 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CCND1P24385 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCND1P24385 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCND1P24385 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.83■■□□□ 1.09
CCND1P24385 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCND1P24385 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCND1P24385 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.83■■□□□ 1.08
CCND1P24385 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCND1P24385 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCND1P24385 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CCND1P24385 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.82■■□□□ 1.08
CCND1P24385 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
CCND1P24385 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.82■■□□□ 1.08
CCND1P24385 AC026310.3-201ENST00000625186 2373 ntBASIC21.82■■□□□ 1.08
CCND1P24385 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCND1P24385 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCND1P24385 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCND1P24385 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.82■■□□□ 1.08
CCND1P24385 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.82■■□□□ 1.08
CCND1P24385 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.82■■□□□ 1.08
CCND1P24385 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.82■■□□□ 1.08
CCND1P24385 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CCND1P24385 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.82■■□□□ 1.08
CCND1P24385 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCND1P24385 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCND1P24385 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CCND1P24385 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
CCND1P24385 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCND1P24385 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.81■■□□□ 1.08
CCND1P24385 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCND1P24385 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCND1P24385 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
CCND1P24385 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.81■■□□□ 1.08
CCND1P24385 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.81■■□□□ 1.08
CCND1P24385 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCND1P24385 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCND1P24385 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCND1P24385 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.8■■□□□ 1.08
CCND1P24385 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CCND1P24385 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCND1P24385 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCND1P24385 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.8■■□□□ 1.08
CCND1P24385 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCND1P24385 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.8■■□□□ 1.08
CCND1P24385 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCND1P24385 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.8■■□□□ 1.08
CCND1P24385 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCND1P24385 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCND1P24385 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCND1P24385 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCND1P24385 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCND1P24385 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCND1P24385 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CCND1P24385 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCND1P24385 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCND1P24385 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCND1P24385 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.79■■□□□ 1.08
CCND1P24385 AC092053.2-201ENST00000640557 1818 ntBASIC21.79■■□□□ 1.08
CCND1P24385 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.79■■□□□ 1.08
CCND1P24385 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CCND1P24385 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.79■■□□□ 1.08
CCND1P24385 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCND1P24385 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCND1P24385 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCND1P24385 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCND1P24385 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.79■■□□□ 1.08
CCND1P24385 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCND1P24385 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.79■■□□□ 1.08
CCND1P24385 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCND1P24385 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCND1P24385 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCND1P24385 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCND1P24385 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms