Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL3P19876 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL3P19876 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL3P19876 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL3P19876 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CXCL3P19876 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CXCL3P19876 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CXCL3P19876 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CXCL3P19876 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CXCL3P19876 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CXCL3P19876 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CXCL3P19876 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CXCL3P19876 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.33■□□□□ 0.53
CXCL3P19876 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CXCL3P19876 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
CXCL3P19876 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.33■□□□□ 0.53
CXCL3P19876 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CXCL3P19876 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.33■□□□□ 0.52
CXCL3P19876 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.33■□□□□ 0.52
CXCL3P19876 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CXCL3P19876 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CXCL3P19876 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.33■□□□□ 0.52
CXCL3P19876 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CXCL3P19876 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.32■□□□□ 0.52
CXCL3P19876 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL3P19876 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.32■□□□□ 0.52
CXCL3P19876 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL3P19876 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL3P19876 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL3P19876 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.32■□□□□ 0.52
CXCL3P19876 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL3P19876 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL3P19876 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL3P19876 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL3P19876 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL3P19876 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CXCL3P19876 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CXCL3P19876 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CXCL3P19876 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL3P19876 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.32■□□□□ 0.52
CXCL3P19876 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.32■□□□□ 0.52
CXCL3P19876 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL3P19876 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.32■□□□□ 0.52
CXCL3P19876 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.32■□□□□ 0.52
CXCL3P19876 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL3P19876 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CXCL3P19876 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL3P19876 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL3P19876 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CXCL3P19876 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
CXCL3P19876 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.31■□□□□ 0.52
CXCL3P19876 ABHD17AP4-201ENST00000411545 909 ntBASIC18.31■□□□□ 0.52
CXCL3P19876 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL3P19876 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL3P19876 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.31■□□□□ 0.52
CXCL3P19876 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.31■□□□□ 0.52
CXCL3P19876 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.31■□□□□ 0.52
CXCL3P19876 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
CXCL3P19876 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL3P19876 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CXCL3P19876 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL3P19876 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.31■□□□□ 0.52
CXCL3P19876 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCL3P19876 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCL3P19876 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CXCL3P19876 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCL3P19876 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CXCL3P19876 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.3■□□□□ 0.52
CXCL3P19876 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.3■□□□□ 0.52
CXCL3P19876 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
CXCL3P19876 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
CXCL3P19876 FEM1AP1-201ENST00000431297 1995 ntBASIC18.3■□□□□ 0.52
CXCL3P19876 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.29■□□□□ 0.52
CXCL3P19876 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CXCL3P19876 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.29■□□□□ 0.52
CXCL3P19876 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.29■□□□□ 0.52
CXCL3P19876 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.29■□□□□ 0.52
CXCL3P19876 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCL3P19876 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCL3P19876 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCL3P19876 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCL3P19876 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCL3P19876 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.29■□□□□ 0.52
CXCL3P19876 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCL3P19876 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CXCL3P19876 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.28■□□□□ 0.52
CXCL3P19876 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXCL3P19876 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CXCL3P19876 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CXCL3P19876 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CXCL3P19876 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXCL3P19876 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXCL3P19876 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.28■□□□□ 0.52
CXCL3P19876 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXCL3P19876 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXCL3P19876 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.28■□□□□ 0.52
CXCL3P19876 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CXCL3P19876 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.28■□□□□ 0.52
CXCL3P19876 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CXCL3P19876 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms