Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
NELFEP18615 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.44■■□□□ 1.02
NELFEP18615 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NELFEP18615 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.44■■□□□ 1.02
NELFEP18615 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NELFEP18615 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
NELFEP18615 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NELFEP18615 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NELFEP18615 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NELFEP18615 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.43■■□□□ 1.02
NELFEP18615 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.43■■□□□ 1.02
NELFEP18615 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NELFEP18615 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NELFEP18615 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
NELFEP18615 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NELFEP18615 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NELFEP18615 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NELFEP18615 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NELFEP18615 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.42■■□□□ 1.02
NELFEP18615 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.42■■□□□ 1.02
NELFEP18615 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NELFEP18615 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
NELFEP18615 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.42■■□□□ 1.02
NELFEP18615 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.42■■□□□ 1.02
NELFEP18615 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
NELFEP18615 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NELFEP18615 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.41■■□□□ 1.02
NELFEP18615 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
NELFEP18615 LINC00526-201ENST00000581067 1875 ntBASIC21.41■■□□□ 1.02
NELFEP18615 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NELFEP18615 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.41■■□□□ 1.02
NELFEP18615 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NELFEP18615 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
NELFEP18615 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.41■■□□□ 1.02
NELFEP18615 AC026271.2-201ENST00000428091 497 ntBASIC21.41■■□□□ 1.02
NELFEP18615 DUX4L4-201ENST00000566884 1269 ntBASIC21.41■■□□□ 1.02
NELFEP18615 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.41■■□□□ 1.02
NELFEP18615 AL499627.2-201ENST00000606283 725 ntBASIC21.41■■□□□ 1.02
NELFEP18615 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
NELFEP18615 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.41■■□□□ 1.02
NELFEP18615 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
NELFEP18615 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
NELFEP18615 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
NELFEP18615 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.41■■□□□ 1.02
NELFEP18615 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NELFEP18615 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
NELFEP18615 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.41■■□□□ 1.02
NELFEP18615 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
NELFEP18615 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NELFEP18615 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NELFEP18615 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
NELFEP18615 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NELFEP18615 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
NELFEP18615 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NELFEP18615 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.4■■□□□ 1.02
NELFEP18615 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NELFEP18615 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NELFEP18615 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NELFEP18615 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
NELFEP18615 AC144652.1-201ENST00000609974 1624 ntBASIC21.4■■□□□ 1.02
NELFEP18615 AL137060.1-201ENST00000618151 2648 ntBASIC21.4■■□□□ 1.02
NELFEP18615 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
NELFEP18615 AC133637.1-201ENST00000624115 1537 ntBASIC21.39■■□□□ 1.02
NELFEP18615 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
NELFEP18615 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NELFEP18615 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NELFEP18615 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NELFEP18615 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.39■■□□□ 1.01
NELFEP18615 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.39■■□□□ 1.01
NELFEP18615 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
NELFEP18615 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NELFEP18615 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
NELFEP18615 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.39■■□□□ 1.01
NELFEP18615 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
NELFEP18615 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.39■■□□□ 1.01
NELFEP18615 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.38■■□□□ 1.01
NELFEP18615 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NELFEP18615 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NELFEP18615 IRS3P-201ENST00000223076 1006 ntBASIC21.38■■□□□ 1.01
NELFEP18615 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NELFEP18615 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.38■■□□□ 1.01
NELFEP18615 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NELFEP18615 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.38■■□□□ 1.01
NELFEP18615 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NELFEP18615 LINC01529-204ENST00000636474 1715 ntBASIC21.38■■□□□ 1.01
NELFEP18615 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.38■■□□□ 1.01
NELFEP18615 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NELFEP18615 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NELFEP18615 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
NELFEP18615 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
NELFEP18615 SLC47A1P1-202ENST00000449666 945 ntBASIC21.37■■□□□ 1.01
NELFEP18615 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
NELFEP18615 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.37■■□□□ 1.01
NELFEP18615 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.37■■□□□ 1.01
NELFEP18615 GUSBP5-202ENST00000510805 1989 ntBASIC21.37■■□□□ 1.01
NELFEP18615 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
NELFEP18615 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
NELFEP18615 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NELFEP18615 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.36■■□□□ 1.01
NELFEP18615 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms