Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
VCLP18206 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VCLP18206 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.85■■□□□ 1.09
VCLP18206 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VCLP18206 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
VCLP18206 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VCLP18206 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VCLP18206 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VCLP18206 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.85■■□□□ 1.09
VCLP18206 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.85■■□□□ 1.09
VCLP18206 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.85■■□□□ 1.09
VCLP18206 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
VCLP18206 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
VCLP18206 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
VCLP18206 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCLP18206 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
VCLP18206 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.84■■□□□ 1.09
VCLP18206 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
VCLP18206 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCLP18206 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.84■■□□□ 1.09
VCLP18206 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.84■■□□□ 1.09
VCLP18206 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VCLP18206 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.84■■□□□ 1.09
VCLP18206 AC142381.2-201ENST00000566120 298 ntBASIC21.84■■□□□ 1.09
VCLP18206 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.84■■□□□ 1.09
VCLP18206 AC133637.1-201ENST00000624115 1537 ntBASIC21.84■■□□□ 1.09
VCLP18206 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCLP18206 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCLP18206 AC127496.7-201ENST00000625110 1798 ntBASIC21.84■■□□□ 1.09
VCLP18206 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
VCLP18206 AC019069.1-201ENST00000610008 1333 ntBASIC21.83■■□□□ 1.09
VCLP18206 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VCLP18206 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VCLP18206 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VCLP18206 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.83■■□□□ 1.09
VCLP18206 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VCLP18206 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.83■■□□□ 1.09
VCLP18206 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.83■■□□□ 1.09
VCLP18206 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.83■■□□□ 1.09
VCLP18206 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
VCLP18206 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
VCLP18206 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.83■■□□□ 1.08
VCLP18206 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.83■■□□□ 1.08
VCLP18206 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
VCLP18206 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VCLP18206 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
VCLP18206 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VCLP18206 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
VCLP18206 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
VCLP18206 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
VCLP18206 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VCLP18206 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VCLP18206 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VCLP18206 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.82■■□□□ 1.08
VCLP18206 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VCLP18206 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
VCLP18206 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
VCLP18206 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VCLP18206 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VCLP18206 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
VCLP18206 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
VCLP18206 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VCLP18206 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VCLP18206 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VCLP18206 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
VCLP18206 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.81■■□□□ 1.08
VCLP18206 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.81■■□□□ 1.08
VCLP18206 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
VCLP18206 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.81■■□□□ 1.08
VCLP18206 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VCLP18206 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.81■■□□□ 1.08
VCLP18206 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.81■■□□□ 1.08
VCLP18206 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.8■■□□□ 1.08
VCLP18206 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VCLP18206 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VCLP18206 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VCLP18206 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
VCLP18206 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VCLP18206 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VCLP18206 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.8■■□□□ 1.08
VCLP18206 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VCLP18206 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.8■■□□□ 1.08
VCLP18206 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.8■■□□□ 1.08
VCLP18206 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VCLP18206 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.8■■□□□ 1.08
VCLP18206 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.8■■□□□ 1.08
VCLP18206 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
VCLP18206 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.79■■□□□ 1.08
VCLP18206 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.79■■□□□ 1.08
VCLP18206 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VCLP18206 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.79■■□□□ 1.08
VCLP18206 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
VCLP18206 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.79■■□□□ 1.08
VCLP18206 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VCLP18206 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.79■■□□□ 1.08
VCLP18206 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.79■■□□□ 1.08
VCLP18206 AC027682.1-201ENST00000562846 899 ntBASIC21.79■■□□□ 1.08
VCLP18206 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.79■■□□□ 1.08
VCLP18206 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.79■■□□□ 1.08
VCLP18206 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms