Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL11A2P13942 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL11A2P13942 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
COL11A2P13942 MYCNOS-205ENST00000641950 531 ntBASIC27.19■■□□□ 1.94
COL11A2P13942 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL11A2P13942 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC27.18■■□□□ 1.94
COL11A2P13942 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
COL11A2P13942 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC27.18■■□□□ 1.94
COL11A2P13942 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC27.18■■□□□ 1.94
COL11A2P13942 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC27.18■■□□□ 1.94
COL11A2P13942 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
COL11A2P13942 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL11A2P13942 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
COL11A2P13942 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
COL11A2P13942 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL11A2P13942 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL11A2P13942 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.17■■□□□ 1.94
COL11A2P13942 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
COL11A2P13942 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
COL11A2P13942 PARP1-202ENST00000366792 553 ntTSL 3 BASIC27.16■■□□□ 1.94
COL11A2P13942 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC27.16■■□□□ 1.94
COL11A2P13942 MDK-213ENST00000617138 635 ntTSL 2 BASIC27.16■■□□□ 1.94
COL11A2P13942 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
COL11A2P13942 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
COL11A2P13942 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL11A2P13942 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL11A2P13942 AC005181.1-201ENST00000604782 1256 ntBASIC27.16■■□□□ 1.94
COL11A2P13942 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC27.15■■□□□ 1.94
COL11A2P13942 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC27.15■■□□□ 1.94
COL11A2P13942 MED17-227ENST00000640521 2047 ntTSL 5 BASIC27.15■■□□□ 1.94
COL11A2P13942 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC27.15■■□□□ 1.94
COL11A2P13942 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
COL11A2P13942 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL11A2P13942 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL11A2P13942 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL11A2P13942 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
COL11A2P13942 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
COL11A2P13942 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
COL11A2P13942 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC27.14■■□□□ 1.94
COL11A2P13942 ASL-203ENST00000380839 1765 ntTSL 5 BASIC27.14■■□□□ 1.93
COL11A2P13942 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC27.13■■□□□ 1.93
COL11A2P13942 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
COL11A2P13942 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
COL11A2P13942 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
COL11A2P13942 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC27.13■■□□□ 1.93
COL11A2P13942 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
COL11A2P13942 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
COL11A2P13942 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
COL11A2P13942 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
COL11A2P13942 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
COL11A2P13942 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC27.12■■□□□ 1.93
COL11A2P13942 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC27.12■■□□□ 1.93
COL11A2P13942 AC093827.2-201ENST00000512654 315 ntBASIC27.12■■□□□ 1.93
COL11A2P13942 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC27.12■■□□□ 1.93
COL11A2P13942 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC27.12■■□□□ 1.93
COL11A2P13942 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
COL11A2P13942 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC27.12■■□□□ 1.93
COL11A2P13942 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC27.12■■□□□ 1.93
COL11A2P13942 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC27.11■■□□□ 1.93
COL11A2P13942 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC27.11■■□□□ 1.93
COL11A2P13942 SLC29A4P1-201ENST00000398760 971 ntBASIC27.11■■□□□ 1.93
COL11A2P13942 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC27.11■■□□□ 1.93
COL11A2P13942 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC27.11■■□□□ 1.93
COL11A2P13942 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL11A2P13942 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
COL11A2P13942 AC083906.2-201ENST00000511578 360 ntBASIC27.1■■□□□ 1.93
COL11A2P13942 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
COL11A2P13942 H19-210ENST00000439725 1929 ntTSL 2 BASIC27.1■■□□□ 1.93
COL11A2P13942 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
COL11A2P13942 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
COL11A2P13942 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
COL11A2P13942 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
COL11A2P13942 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC27.1■■□□□ 1.93
COL11A2P13942 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
COL11A2P13942 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC27.1■■□□□ 1.93
COL11A2P13942 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC27.1■■□□□ 1.93
COL11A2P13942 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
COL11A2P13942 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC27.1■■□□□ 1.93
COL11A2P13942 PARP1-210ENST00000629232 477 ntTSL 5 BASIC27.1■■□□□ 1.93
COL11A2P13942 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
COL11A2P13942 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
COL11A2P13942 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC27.09■■□□□ 1.93
COL11A2P13942 EED-207ENST00000528180 1745 ntTSL 5 BASIC27.09■■□□□ 1.93
COL11A2P13942 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
COL11A2P13942 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC27.09■■□□□ 1.93
COL11A2P13942 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
COL11A2P13942 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
COL11A2P13942 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
COL11A2P13942 AC007322.1-201ENST00000426983 750 ntBASIC27.08■■□□□ 1.93
COL11A2P13942 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC27.08■■□□□ 1.93
COL11A2P13942 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC27.08■■□□□ 1.93
COL11A2P13942 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
COL11A2P13942 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
COL11A2P13942 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
COL11A2P13942 AC142381.3-201ENST00000568208 1670 ntBASIC27.07■■□□□ 1.92
COL11A2P13942 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
COL11A2P13942 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
COL11A2P13942 LINC00543-201ENST00000567234 1845 ntBASIC27.07■■□□□ 1.92
COL11A2P13942 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
COL11A2P13942 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC27.07■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms