Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL4A2P08572 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL4A2P08572 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.34■■□□□ 1.17
COL4A2P08572 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.34■■□□□ 1.17
COL4A2P08572 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL4A2P08572 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL4A2P08572 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL4A2P08572 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
COL4A2P08572 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL4A2P08572 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
COL4A2P08572 ESRRAP2-201ENST00000418437 1549 ntBASIC22.33■■□□□ 1.17
COL4A2P08572 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL4A2P08572 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
COL4A2P08572 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.33■■□□□ 1.17
COL4A2P08572 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.33■■□□□ 1.17
COL4A2P08572 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.33■■□□□ 1.17
COL4A2P08572 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL4A2P08572 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
COL4A2P08572 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.32■■□□□ 1.16
COL4A2P08572 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.32■■□□□ 1.16
COL4A2P08572 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COL4A2P08572 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
COL4A2P08572 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.32■■□□□ 1.16
COL4A2P08572 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL4A2P08572 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.31■■□□□ 1.16
COL4A2P08572 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.31■■□□□ 1.16
COL4A2P08572 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL4A2P08572 AC098934.4-201ENST00000564127 592 ntBASIC22.31■■□□□ 1.16
COL4A2P08572 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.31■■□□□ 1.16
COL4A2P08572 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
COL4A2P08572 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL4A2P08572 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL4A2P08572 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.31■■□□□ 1.16
COL4A2P08572 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.31■■□□□ 1.16
COL4A2P08572 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL4A2P08572 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.31■■□□□ 1.16
COL4A2P08572 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.31■■□□□ 1.16
COL4A2P08572 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.31■■□□□ 1.16
COL4A2P08572 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.3■■□□□ 1.16
COL4A2P08572 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.3■■□□□ 1.16
COL4A2P08572 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
COL4A2P08572 GPX1P1-201ENST00000388829 606 ntBASIC22.3■■□□□ 1.16
COL4A2P08572 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
COL4A2P08572 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL4A2P08572 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
COL4A2P08572 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL4A2P08572 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL4A2P08572 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL4A2P08572 CNN2P6-201ENST00000439038 900 ntBASIC22.29■■□□□ 1.16
COL4A2P08572 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL4A2P08572 AL353803.4-201ENST00000565882 1934 ntBASIC22.29■■□□□ 1.16
COL4A2P08572 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL4A2P08572 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.29■■□□□ 1.16
COL4A2P08572 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL4A2P08572 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL4A2P08572 MYCNOS-205ENST00000641950 531 ntBASIC22.28■■□□□ 1.16
COL4A2P08572 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL4A2P08572 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.28■■□□□ 1.16
COL4A2P08572 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL4A2P08572 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL4A2P08572 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.28■■□□□ 1.16
COL4A2P08572 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
COL4A2P08572 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.28■■□□□ 1.16
COL4A2P08572 AC231657.2-201ENST00000624556 255 ntBASIC22.28■■□□□ 1.16
COL4A2P08572 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL4A2P08572 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL4A2P08572 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.28■■□□□ 1.16
COL4A2P08572 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL4A2P08572 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL4A2P08572 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
COL4A2P08572 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
COL4A2P08572 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL4A2P08572 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.27■■□□□ 1.16
COL4A2P08572 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.27■■□□□ 1.16
COL4A2P08572 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL4A2P08572 MIR4651-201ENST00000582622 73 ntBASIC22.27■■□□□ 1.16
COL4A2P08572 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL4A2P08572 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL4A2P08572 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL4A2P08572 AC004812.2-201ENST00000611079 2094 ntBASIC22.26■■□□□ 1.15
COL4A2P08572 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
COL4A2P08572 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
COL4A2P08572 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
COL4A2P08572 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.26■■□□□ 1.15
COL4A2P08572 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.26■■□□□ 1.15
COL4A2P08572 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.26■■□□□ 1.15
COL4A2P08572 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL4A2P08572 DUSP8P3-201ENST00000399571 1760 ntBASIC22.26■■□□□ 1.15
COL4A2P08572 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
COL4A2P08572 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.26■■□□□ 1.15
COL4A2P08572 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL4A2P08572 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL4A2P08572 AC020928.2-201ENST00000588717 2197 ntBASIC22.26■■□□□ 1.15
COL4A2P08572 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.26■■□□□ 1.15
COL4A2P08572 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
COL4A2P08572 TSPY6P-201ENST00000448518 926 ntBASIC22.26■■□□□ 1.15
COL4A2P08572 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL4A2P08572 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.26■■□□□ 1.15
COL4A2P08572 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.26■■□□□ 1.15
COL4A2P08572 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms