Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGN1P05114 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGN1P05114 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMGN1P05114 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.72■□□□□ 0.75
HMGN1P05114 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGN1P05114 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.72■□□□□ 0.75
HMGN1P05114 AC010542.4-201ENST00000563151 1910 ntBASIC19.72■□□□□ 0.75
HMGN1P05114 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.72■□□□□ 0.75
HMGN1P05114 AC021242.3-201ENST00000607598 1377 ntBASIC19.72■□□□□ 0.75
HMGN1P05114 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.72■□□□□ 0.75
HMGN1P05114 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.72■□□□□ 0.75
HMGN1P05114 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.72■□□□□ 0.75
HMGN1P05114 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.72■□□□□ 0.75
HMGN1P05114 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
HMGN1P05114 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.72■□□□□ 0.75
HMGN1P05114 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.72■□□□□ 0.75
HMGN1P05114 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGN1P05114 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMGN1P05114 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMGN1P05114 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGN1P05114 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGN1P05114 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGN1P05114 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
HMGN1P05114 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.71■□□□□ 0.75
HMGN1P05114 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HMGN1P05114 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.71■□□□□ 0.75
HMGN1P05114 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.71■□□□□ 0.75
HMGN1P05114 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.71■□□□□ 0.75
HMGN1P05114 FAM99A-202ENST00000538190 1989 ntBASIC19.71■□□□□ 0.75
HMGN1P05114 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGN1P05114 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.71■□□□□ 0.75
HMGN1P05114 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGN1P05114 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.71■□□□□ 0.75
HMGN1P05114 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGN1P05114 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGN1P05114 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGN1P05114 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.7■□□□□ 0.74
HMGN1P05114 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGN1P05114 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HMGN1P05114 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGN1P05114 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGN1P05114 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGN1P05114 BX664725.1-201ENST00000438252 379 ntBASIC19.7■□□□□ 0.74
HMGN1P05114 AL033527.3-201ENST00000566366 1196 ntBASIC19.7■□□□□ 0.74
HMGN1P05114 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGN1P05114 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGN1P05114 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGN1P05114 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGN1P05114 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HMGN1P05114 AC026310.3-201ENST00000625186 2373 ntBASIC19.7■□□□□ 0.74
HMGN1P05114 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGN1P05114 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.7■□□□□ 0.74
HMGN1P05114 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMGN1P05114 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGN1P05114 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.69■□□□□ 0.74
HMGN1P05114 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGN1P05114 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HMGN1P05114 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGN1P05114 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.69■□□□□ 0.74
HMGN1P05114 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGN1P05114 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
HMGN1P05114 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.68■□□□□ 0.74
HMGN1P05114 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGN1P05114 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGN1P05114 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HMGN1P05114 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.68■□□□□ 0.74
HMGN1P05114 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGN1P05114 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGN1P05114 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGN1P05114 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
HMGN1P05114 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.68■□□□□ 0.74
HMGN1P05114 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.68■□□□□ 0.74
HMGN1P05114 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.68■□□□□ 0.74
HMGN1P05114 AL121603.2-201ENST00000557373 2117 ntBASIC19.68■□□□□ 0.74
HMGN1P05114 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
HMGN1P05114 AC004687.1-201ENST00000579003 1625 ntBASIC19.68■□□□□ 0.74
HMGN1P05114 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGN1P05114 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HMGN1P05114 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.68■□□□□ 0.74
HMGN1P05114 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.67■□□□□ 0.74
HMGN1P05114 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HMGN1P05114 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGN1P05114 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGN1P05114 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HMGN1P05114 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGN1P05114 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.67■□□□□ 0.74
HMGN1P05114 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.67■□□□□ 0.74
HMGN1P05114 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.67■□□□□ 0.74
HMGN1P05114 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGN1P05114 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGN1P05114 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HMGN1P05114 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGN1P05114 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.66■□□□□ 0.74
HMGN1P05114 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.66■□□□□ 0.74
HMGN1P05114 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HMGN1P05114 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
HMGN1P05114 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.66■□□□□ 0.74
HMGN1P05114 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
HMGN1P05114 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HMGN1P05114 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms