Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC25.29■■□□□ 1.64
ALDH1A1P00352 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ALDH1A1P00352 RNA5SP413-201ENST00000516373 109 ntBASIC25.29■■□□□ 1.64
ALDH1A1P00352 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
ALDH1A1P00352 AC004687.1-201ENST00000579003 1625 ntBASIC25.28■■□□□ 1.64
ALDH1A1P00352 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
ALDH1A1P00352 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC25.28■■□□□ 1.64
ALDH1A1P00352 AC098934.4-201ENST00000564127 592 ntBASIC25.28■■□□□ 1.64
ALDH1A1P00352 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC25.28■■□□□ 1.64
ALDH1A1P00352 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.28■■□□□ 1.64
ALDH1A1P00352 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ALDH1A1P00352 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC25.28■■□□□ 1.64
ALDH1A1P00352 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.27■■□□□ 1.64
ALDH1A1P00352 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ALDH1A1P00352 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ALDH1A1P00352 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ALDH1A1P00352 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ALDH1A1P00352 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ALDH1A1P00352 CNN2P6-201ENST00000439038 900 ntBASIC25.27■■□□□ 1.64
ALDH1A1P00352 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC25.27■■□□□ 1.64
ALDH1A1P00352 AP001160.3-201ENST00000601484 763 ntBASIC25.27■■□□□ 1.64
ALDH1A1P00352 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ALDH1A1P00352 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.27■■□□□ 1.64
ALDH1A1P00352 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ALDH1A1P00352 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ALDH1A1P00352 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ALDH1A1P00352 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
ALDH1A1P00352 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
ALDH1A1P00352 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
ALDH1A1P00352 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC25.26■■□□□ 1.63
ALDH1A1P00352 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
ALDH1A1P00352 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ALDH1A1P00352 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
ALDH1A1P00352 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ALDH1A1P00352 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ALDH1A1P00352 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
ALDH1A1P00352 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ALDH1A1P00352 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ALDH1A1P00352 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC25.25■■□□□ 1.63
ALDH1A1P00352 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC25.25■■□□□ 1.63
ALDH1A1P00352 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ALDH1A1P00352 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ALDH1A1P00352 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ALDH1A1P00352 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ALDH1A1P00352 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ALDH1A1P00352 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ALDH1A1P00352 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.24■■□□□ 1.63
ALDH1A1P00352 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ALDH1A1P00352 RHEB-204ENST00000472642 900 ntTSL 3 BASIC25.24■■□□□ 1.63
ALDH1A1P00352 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
ALDH1A1P00352 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
ALDH1A1P00352 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ALDH1A1P00352 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ALDH1A1P00352 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
ALDH1A1P00352 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ALDH1A1P00352 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ALDH1A1P00352 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ALDH1A1P00352 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ALDH1A1P00352 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC25.23■■□□□ 1.63
ALDH1A1P00352 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ALDH1A1P00352 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ALDH1A1P00352 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ALDH1A1P00352 RPS2P52-201ENST00000469610 820 ntBASIC25.22■■□□□ 1.63
ALDH1A1P00352 IRX5-204ENST00000560154 879 ntTSL 5 BASIC25.22■■□□□ 1.63
ALDH1A1P00352 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC25.22■■□□□ 1.63
ALDH1A1P00352 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC25.22■■□□□ 1.63
ALDH1A1P00352 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ALDH1A1P00352 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.22■■□□□ 1.63
ALDH1A1P00352 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ALDH1A1P00352 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.21■■□□□ 1.63
ALDH1A1P00352 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
ALDH1A1P00352 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ALDH1A1P00352 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC25.21■■□□□ 1.63
ALDH1A1P00352 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.21■■□□□ 1.63
ALDH1A1P00352 AC010536.3-201ENST00000620306 533 ntBASIC25.21■■□□□ 1.63
ALDH1A1P00352 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC25.2■■□□□ 1.63
ALDH1A1P00352 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.63
ALDH1A1P00352 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.2■■□□□ 1.62
ALDH1A1P00352 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ALDH1A1P00352 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ALDH1A1P00352 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC25.2■■□□□ 1.62
ALDH1A1P00352 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ALDH1A1P00352 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
ALDH1A1P00352 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
ALDH1A1P00352 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ALDH1A1P00352 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.19■■□□□ 1.62
ALDH1A1P00352 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
ALDH1A1P00352 KRT18P20-201ENST00000548986 1279 ntBASIC25.19■■□□□ 1.62
ALDH1A1P00352 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
ALDH1A1P00352 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC25.18■■□□□ 1.62
ALDH1A1P00352 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC25.18■■□□□ 1.62
ALDH1A1P00352 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ALDH1A1P00352 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC25.18■■□□□ 1.62
ALDH1A1P00352 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC25.18■■□□□ 1.62
ALDH1A1P00352 PPP1R14BP2-201ENST00000426284 444 ntBASIC25.18■■□□□ 1.62
ALDH1A1P00352 DUSP5P2-201ENST00000426873 1033 ntBASIC25.18■■□□□ 1.62
ALDH1A1P00352 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
ALDH1A1P00352 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ALDH1A1P00352 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
ALDH1A1P00352 MFF-207ENST00000409565 1548 ntTSL 2 BASIC25.17■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms