Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE6O95741 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.4■■□□□ 1.02
CPNE6O95741 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPNE6O95741 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CPNE6O95741 AL024507.2-201ENST00000606070 2574 ntBASIC21.4■■□□□ 1.02
CPNE6O95741 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.39■■□□□ 1.02
CPNE6O95741 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.39■■□□□ 1.02
CPNE6O95741 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CPNE6O95741 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CPNE6O95741 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
CPNE6O95741 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CPNE6O95741 AP005435.1-201ENST00000529293 1178 ntBASIC21.39■■□□□ 1.01
CPNE6O95741 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.39■■□□□ 1.01
CPNE6O95741 AL031602.1-201ENST00000633169 911 ntBASIC21.39■■□□□ 1.01
CPNE6O95741 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CPNE6O95741 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CPNE6O95741 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.38■■□□□ 1.01
CPNE6O95741 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE6O95741 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.38■■□□□ 1.01
CPNE6O95741 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.38■■□□□ 1.01
CPNE6O95741 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE6O95741 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
CPNE6O95741 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE6O95741 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.38■■□□□ 1.01
CPNE6O95741 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CPNE6O95741 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.38■■□□□ 1.01
CPNE6O95741 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE6O95741 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.38■■□□□ 1.01
CPNE6O95741 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CPNE6O95741 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE6O95741 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE6O95741 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.38■■□□□ 1.01
CPNE6O95741 MIR6084-201ENST00000622012 110 ntBASIC21.38■■□□□ 1.01
CPNE6O95741 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE6O95741 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE6O95741 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.38■■□□□ 1.01
CPNE6O95741 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE6O95741 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE6O95741 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE6O95741 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.37■■□□□ 1.01
CPNE6O95741 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
CPNE6O95741 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE6O95741 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.37■■□□□ 1.01
CPNE6O95741 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.37■■□□□ 1.01
CPNE6O95741 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.37■■□□□ 1.01
CPNE6O95741 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.37■■□□□ 1.01
CPNE6O95741 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE6O95741 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE6O95741 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE6O95741 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CPNE6O95741 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE6O95741 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE6O95741 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE6O95741 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE6O95741 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.36■■□□□ 1.01
CPNE6O95741 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE6O95741 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE6O95741 DUX4L2-201ENST00000561772 1275 ntBASIC21.36■■□□□ 1.01
CPNE6O95741 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.36■■□□□ 1.01
CPNE6O95741 DUX4L6-201ENST00000626483 1275 ntBASIC21.36■■□□□ 1.01
CPNE6O95741 DUX4L1-201ENST00000627662 1275 ntBASIC21.36■■□□□ 1.01
CPNE6O95741 DUX4L8-201ENST00000629013 1275 ntBASIC21.36■■□□□ 1.01
CPNE6O95741 DUX4L3-201ENST00000630187 1275 ntBASIC21.36■■□□□ 1.01
CPNE6O95741 DUX4L7-201ENST00000630678 1275 ntBASIC21.36■■□□□ 1.01
CPNE6O95741 DUX4L5-201ENST00000630834 1275 ntBASIC21.36■■□□□ 1.01
CPNE6O95741 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.36■■□□□ 1.01
CPNE6O95741 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.36■■□□□ 1.01
CPNE6O95741 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE6O95741 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE6O95741 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE6O95741 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.36■■□□□ 1.01
CPNE6O95741 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CPNE6O95741 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE6O95741 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE6O95741 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.35■■□□□ 1.01
CPNE6O95741 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CPNE6O95741 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE6O95741 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE6O95741 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
CPNE6O95741 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE6O95741 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.35■■□□□ 1.01
CPNE6O95741 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.35■■□□□ 1.01
CPNE6O95741 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE6O95741 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE6O95741 KRT18P5-201ENST00000436075 1291 ntBASIC21.35■■□□□ 1.01
CPNE6O95741 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.35■■□□□ 1.01
CPNE6O95741 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE6O95741 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE6O95741 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE6O95741 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE6O95741 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.35■■□□□ 1.01
CPNE6O95741 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE6O95741 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE6O95741 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.34■■□□□ 1.01
CPNE6O95741 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE6O95741 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CPNE6O95741 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.34■■□□□ 1.01
CPNE6O95741 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE6O95741 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE6O95741 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms