Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RARRES2P6-201ENST00000567333 442 ntBASIC23.03■■□□□ 1.28
BEST1O76090 MIR6084-201ENST00000622012 110 ntBASIC23.03■■□□□ 1.28
BEST1O76090 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
BEST1O76090 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.03■■□□□ 1.28
BEST1O76090 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
BEST1O76090 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.03■■□□□ 1.28
BEST1O76090 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
BEST1O76090 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
BEST1O76090 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
BEST1O76090 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
BEST1O76090 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
BEST1O76090 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.02■■□□□ 1.28
BEST1O76090 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
BEST1O76090 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
BEST1O76090 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.02■■□□□ 1.28
BEST1O76090 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.02■■□□□ 1.28
BEST1O76090 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.02■■□□□ 1.28
BEST1O76090 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
BEST1O76090 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
BEST1O76090 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
BEST1O76090 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
BEST1O76090 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
BEST1O76090 AC012414.1-201ENST00000556676 535 ntBASIC23.01■■□□□ 1.27
BEST1O76090 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
BEST1O76090 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.01■■□□□ 1.27
BEST1O76090 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
BEST1O76090 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
BEST1O76090 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
BEST1O76090 OXCT2P1-201ENST00000447263 1535 ntBASIC23.01■■□□□ 1.27
BEST1O76090 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.01■■□□□ 1.27
BEST1O76090 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
BEST1O76090 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
BEST1O76090 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23■■□□□ 1.27
BEST1O76090 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
BEST1O76090 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23■■□□□ 1.27
BEST1O76090 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
BEST1O76090 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
BEST1O76090 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23■■□□□ 1.27
BEST1O76090 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23■■□□□ 1.27
BEST1O76090 AC087239.1-201ENST00000622671 572 ntBASIC23■■□□□ 1.27
BEST1O76090 AC105233.4-201ENST00000642045 216 ntBASIC23■■□□□ 1.27
BEST1O76090 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
BEST1O76090 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
BEST1O76090 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
BEST1O76090 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.99■■□□□ 1.27
BEST1O76090 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
BEST1O76090 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
BEST1O76090 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.99■■□□□ 1.27
BEST1O76090 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
BEST1O76090 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
BEST1O76090 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
BEST1O76090 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
BEST1O76090 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.99■■□□□ 1.27
BEST1O76090 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.99■■□□□ 1.27
BEST1O76090 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.99■■□□□ 1.27
BEST1O76090 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.99■■□□□ 1.27
BEST1O76090 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.99■■□□□ 1.27
BEST1O76090 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
BEST1O76090 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
BEST1O76090 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
BEST1O76090 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
BEST1O76090 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
BEST1O76090 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
BEST1O76090 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
BEST1O76090 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.98■■□□□ 1.27
BEST1O76090 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
BEST1O76090 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
BEST1O76090 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
BEST1O76090 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
BEST1O76090 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
BEST1O76090 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.98■■□□□ 1.27
BEST1O76090 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.98■■□□□ 1.27
BEST1O76090 AL358852.1-201ENST00000623174 1268 ntBASIC22.98■■□□□ 1.27
BEST1O76090 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
BEST1O76090 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.98■■□□□ 1.27
BEST1O76090 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
BEST1O76090 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
BEST1O76090 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
BEST1O76090 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
BEST1O76090 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.97■■□□□ 1.27
BEST1O76090 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
BEST1O76090 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
BEST1O76090 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
BEST1O76090 SMUG1P1-201ENST00000590640 811 ntBASIC22.97■■□□□ 1.27
BEST1O76090 AL354811.1-201ENST00000610286 706 ntBASIC22.97■■□□□ 1.27
BEST1O76090 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
BEST1O76090 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
BEST1O76090 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.97■■□□□ 1.27
BEST1O76090 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
BEST1O76090 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
BEST1O76090 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
BEST1O76090 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
BEST1O76090 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
BEST1O76090 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.96■■□□□ 1.27
BEST1O76090 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
BEST1O76090 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
BEST1O76090 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.96■■□□□ 1.27
BEST1O76090 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
BEST1O76090 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
BEST1O76090 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms